Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 38 curated entries in PaperBLAST's database that match '4.4.1.5' as complete word(s).

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3766: Lactoylglutathione lyase
is similar to:
PaperBLAST

Q88GF8: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas putida

100% id,
100% cov

gloA / P16635: glyoxalase I monomer (EC 4.4.1.5) from Pseudomonas putida

89% id,
100% cov

Q9HU72: lactoylglutathione lyase (EC 4.4.1.5) from Pseudomonas aeruginosa

56% id,
95% cov

More...

PP_2568: Ring-cleaving dioxygenase
is similar to:
PaperBLAST

LGUL_ECOLI / P0AC81: Lactoylglutathione lyase; Aldoketomutase; Glyoxalase I; Glx I; Ketone-aldehyde mutase; Methylglyoxalase; S-D-lactoylglutathione methylglyoxal lyase; EC 4.4.1.5 from Escherichia coli
GloA / b1651: glyoxalase I (EC 4.4.1.5) from Escherichia coli
gloA / RF|NP_416168.1: lactoylglutathione lyase; EC 4.4.1.5 from Shigella flexneri
gloA / P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli
P0AC81: lactoylglutathione lyase (EC 4.4.1.5) from Escherichia coli

30% id,
88% cov

Q68RJ8: lactoylglutathione lyase (EC 4.4.1.5) from Leishmania major

32% id,
81% cov

Q2PYM9: lactoylglutathione lyase (EC 4.4.1.5) from Leishmania infantum

30% id,
81% cov

More...

PP_0893: ThiJ/PfpI family protein
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

51% id,
49% cov

PP_2725: Protease PfpI
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana

32% id,
48% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1035119-1035745 (frame +2) on AE015451
is similar to:
PaperBLAST

DJ1D_ARATH / Q9M8R4: Protein DJ-1 homolog D; AtDJ1D; Lactoylglutathione lyase DJ1D; EC 4.4.1.5 from Arabidopsis thaliana
Also see hits to annotated proteins above

57% id,
51% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory