Curated BLAST for Genomes


Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 11 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 6 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_2459: ribose pyranase
is similar to:

FUCM_ECOLI / P0AEN8: L-fucose mutarotase; D-ribose pyranase; Fucose 1-epimerase; Type-2 mutarotase; EC; EC from Escherichia coli
FucU / b2804: L-fucose mutarotase (EC; EC from Escherichia coli
fucU / P0AEN8: L-fucose mutarotase (EC; EC from Escherichia coli
P0AEN8: L-fucose mutarotase (EC; D-ribose pyranase (EC from Escherichia coli

30% id,
99% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Did not find any hits to reading frames.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory