Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 12 curated entries in PaperBLAST's database that match '5.1.99.1'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_2554: putative 3-dehydroshikimate dehydratase
is similar to:
PaperBLAST

mcee / A9WGS0: methylmalonyl-CoA epimerase (EC 5.1.99.1) from Chloroflexus aurantiacus

28% id,
71% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory