Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 17 curated entries in PaperBLAST's database that match '5.3.1.7' as complete word(s).

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_1014: aldose-ketose isomerase
is similar to:
PaperBLAST

MANI_PSEC1 / A0A0P9JFY5: D-mannose isomerase; PsMIaseA; EC 5.3.1.7 from Pseudomonas cannabina

65% id,
99% cov

PS417_22150: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas simiae

66% id,
97% cov

AO356_05200: D-mannose isomerase (EC 5.3.1.7) from Pseudomonas fluorescens

66% id,
96% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory