Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 9 curated entries in PaperBLAST's database that match '5.3.3.4' as complete word(s).

These curated entries have 7 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_3714: Muconolactone Delta-isomerase
is similar to:
PaperBLAST

CATC_PSEPU / P00948: Muconolactone Delta-isomerase; MIase; EC 5.3.3.4 from Pseudomonas putida
catC / P00948: muconolactone isomerase subunit (EC 5.3.3.4) from Pseudomonas putida

95% id,
100% cov

PfGW456L13_3823: Muconolactone isomerase (EC 5.3.3.4) from Pseudomonas fluorescens

80% id,
100% cov

PS417_23665: Muconolactone isomerase (EC 5.3.3.4) from Pseudomonas simiae

80% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory