Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 117 curated entries in PaperBLAST's database that match '6.3.1.2' as complete word(s).

These curated entries have 85 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_5046: glutamine synthetase
is similar to:
PaperBLAST

GLN1B_PSETA / Q3V5W6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Pseudomonas taetrolens

93% id,
100% cov

glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Escherichia coli
glnA / P0A9C5: glutamine synthetase (EC 6.3.1.2) from Escherichia coli

68% id,
99% cov

GLN1B_SALTY / P0A1P6: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I beta; GSI beta; EC 6.3.1.2 from Salmonella typhimurium
glnA: glutamate--ammonia ligase; EC 6.3.1.2 from Salmonella enterica
P0A1P6: glutamine synthetase (EC 6.3.1.2) from Salmonella enterica

68% id,
99% cov

More...

PP_4547: putative Glutamine synthetase
is similar to:
PaperBLAST

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

33% id,
94% cov

F2RM17: glutamine synthetase (EC 6.3.1.2) from Haloferax mediterranei

32% id,
97% cov

GLNA1_METMA / Q8PY99: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Methanosarcina mazei
Q8PY99: glutamine synthetase (EC 6.3.1.2) from Methanosarcina mazei

29% id,
95% cov

More...

PP_5183: glutamylpolyamine synthetase
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

32% id,
97% cov

GLNA_METJA / Q60182: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Methanocaldococcus jannaschii
Q60182: glutamine synthetase (EC 6.3.1.2) from Methanocaldococcus jannaschii

29% id,
99% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

30% id,
96% cov

More...

PP_3148: putative Glutamine synthetase
is similar to:
PaperBLAST

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

32% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

30% id,
98% cov

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

33% id,
88% cov

More...

PP_4399: putative Glutamine synthetase
is similar to:
PaperBLAST

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

33% id,
92% cov

GLNA_THET8 / Q5SIP0: Glutamine synthetase; GS; Glutamate--ammonia ligase; EC 6.3.1.2 from Thermus thermophilus

36% id,
80% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

34% id,
82% cov

More...

PP_5299: glutamate-putrescine ligase
is similar to:
PaperBLAST

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

31% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

31% id,
95% cov

GLN1A_BACSU / P12425: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Bacillus subtilis
P12425: glutamine synthetase (EC 6.3.1.2) from Bacillus subtilis

28% id,
99% cov

More...

PP_5184: glutamylpolyamine synthetase
is similar to:
PaperBLAST

P36205: glutamine synthetase (EC 6.3.1.2) from Thermotoga maritima

31% id,
97% cov

O33342: glutamine synthetase (EC 6.3.1.2) from Mycobacterium tuberculosis

32% id,
93% cov

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

30% id,
95% cov

More...

PP_2178: glutamate-putrescine ligase
is similar to:
PaperBLAST

GLNA_THEKO / O08467: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase I alpha; GSI alpha; EC 6.3.1.2 from Thermococcus kodakarensis
O08467: glutamine synthetase (EC 6.3.1.2) from Pyrococcus sp.

28% id,
94% cov

P36687: glutamine synthetase (EC 6.3.1.2) from Pyrococcus woesei

28% id,
93% cov

GLNA3_RHIME / O87393: Glutamine synthetase; GS; Glutamate--ammonia ligase; Glutamine synthetase III; GSIII; EC 6.3.1.2 from Rhizobium meliloti

28% id,
94% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 8 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory