Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 39 curated entries in PaperBLAST's database that match '6.3.5.4' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_1750: asparagine synthetase
is similar to:
PaperBLAST

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

28% id,
99% cov

ASNH_MYCBO / P64248: Putative asparagine synthetase [glutamine-hydrolyzing]; EC 6.3.5.4 from Mycobacterium bovis

36% id,
61% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

35% id,
60% cov

More...

PP_5409: L-glutamine/D-fructose-6-phosphate aminotransferase
is similar to:
PaperBLAST

Q9SP20: asparagine synthase (glutamine-hydrolysing) (EC 6.3.5.4) from Helianthus annuus

27% id,
26% cov

asnB / GB|CAB15032.1: asparagine synthase (glutamine-hydrolysing) 1; EC 6.3.5.4 from Bacillus subtilis

31% id,
15% cov

asnO / GI|1934835: asparagine synthase (glutamine-hydrolysing) 3; EC 6.3.5.4 from Bacillus subtilis

28% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory