Searching in Pseudomonas putida KT2440 (Putida)
Found 3 curated entries in PaperBLAST's database that match '2-deoxy-D-ribonate 3-dehydrogenase' as complete word(s).
These curated entries have 3 distinct sequences.
Running ublast with E ≤ 0.01
Found 17 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_2784: Oxidoreductase, short-chain dehydrogenase/reductase family is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 36% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 33% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 94% cov |
| PP_1951: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 98% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 99% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 95% cov |
| PP_1817: Oxidoreductase, short-chain dehydrogenase/reductase family is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 95% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 95% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 30% id, 95% cov |
| PP_1946: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 32% id, 95% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 32% id, 95% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 95% cov |
| PP_0581: 3-oxoacyl-(Acyl-carrier-protein) reductase is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 30% id, 97% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 28% id, 98% cov |
| PP_3926: short-chain dehydrogenase is similar to: | PaperBLAST |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 31% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 94% cov |
| PP_2794: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 30% id, 97% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 28% id, 94% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 94% cov |
| PP_2214: 3-hydroxyacyl-CoA dehydrogenase type-2 is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 31% id, 92% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 92% cov |
| PP_1953: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 29% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 29% id, 94% cov |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 94% cov |
| PP_2723: Uncharacterized oxidoreductase YhdF is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 27% id, 98% cov |
| PP_2783: 3-oxoacyl-(Acyl-carrier-protein) reductase is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 28% id, 94% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 26% id, 93% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 94% cov |
| PP_1708: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 91% cov |
| PP_1274: Oxidoreductase, short-chain dehydrogenase/reductase family is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 32% id, 69% cov |
| PP_2711: Oxidoreductase, short-chain dehydrogenase/reductase family is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 26% id, 81% cov |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 26% id, 76% cov |
| PP_1745: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
BPHYT_RS04775: 2-deoxy-D-ribonate 3-dehydrogenase from Burkholderia phytofirmans | 28% id, 70% cov |
H281DRAFT_00644: 2-deoxy-D-ribonate 3-dehydrogenase from Paraburkholderia bryophila | 26% id, 70% cov |
| PP_2989: Oxidoreductase, short chain dehydrogenase/reductase family is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 29% id, 67% cov |
| PP_2737: Oxidoreductase, short-chain dehydrogenase/reductase family is similar to: | PaperBLAST |
PS417_07245: 2-deoxy-D-ribonate 3-dehydrogenase from Pseudomonas simiae | 27% id, 69% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 14 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory