Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 21 curated entries in PaperBLAST's database that match 'Glycine cleavage system H' as complete word(s).

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_5193: glycine cleavage system H protein 2 is similar to:	PaperBLAST
GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli Gcv / b2904: glycine cleavage system H protein from Escherichia coli gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli	63% id, 99% cov
GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus	57% id, 96% cov
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus	48% id, 98% cov
GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis	45% id, 98% cov
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.	44% id, 93% cov
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii	55% id, 71% cov
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa	52% id, 74% cov
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana	47% id, 77% cov
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana	47% id, 77% cov
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia	49% id, 73% cov
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens	49% id, 72% cov
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus	47% id, 72% cov
GCSH_CHICK / P11183: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Gallus gallus	47% id, 71% cov
GCSH_SCHPO / Q9HDV9: Putative glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Schizosaccharomyces pombe	46% id, 70% cov
GCSH_YEAST / P39726: Glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Saccharomyces cerevisiae	37% id, 75% cov
More...

PP_0989: glycine cleavage system H protein 1 is similar to:	PaperBLAST
GCSH_THET8 / Q5SKW9: Glycine cleavage system H protein from Thermus thermophilus	53% id, 93% cov
GCSH_ECOLI / P0A6T9: Glycine cleavage system H protein from Escherichia coli Gcv / b2904: glycine cleavage system H protein from Escherichia coli gcvH / P0A6T9: glycine cleavage system H protein from Escherichia coli	51% id, 95% cov
GCSH_STAAM / P64213: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Staphylococcus aureus	46% id, 95% cov
GCSH_BACSU / O32174: Glycine cleavage system H protein; Octanoyl/lipoyl carrier protein from Bacillus subtilis	42% id, 97% cov
gcvH / P73560: glycine cleavage system H-protein (EC 1.4.1.27) from Synechocystis sp.	42% id, 89% cov
GCSH / A8HYD5: glycine cleavage system H protein (EC 1.4.1.27) from Chlamydomonas reinhardtii	47% id, 72% cov
GCSH_CHICK / P11183: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Gallus gallus	43% id, 77% cov
GCSH_ORYSJ / A3C6G9: Glycine cleavage system H protein, mitochondrial from Oryza sativa	43% id, 76% cov
GCSH_SCHPO / Q9HDV9: Putative glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Schizosaccharomyces pombe	43% id, 73% cov
GCSH_YEAST / P39726: Glycine cleavage system H protein, mitochondrial; Glycine decarboxylase complex subunit H from Saccharomyces cerevisiae	42% id, 74% cov
GCSH3_ARATH / Q9LQL0: Glycine cleavage system H protein 3, mitochondrial from Arabidopsis thaliana	40% id, 77% cov
GCSH1_ARATH / P25855: Glycine cleavage system H protein 1, mitochondrial from Arabidopsis thaliana GDH1 / P25855: glycine cleavage system H protein 1 (EC 1.4.1.27) from Arabidopsis thaliana	40% id, 77% cov
GCSH_FLATR / P46485: Glycine cleavage system H protein, mitochondrial; Lipoyl-bearing H protein from Flaveria trinervia	39% id, 77% cov
GCSH_BOVIN / P20821: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Bos taurus	41% id, 73% cov
GCSH_HUMAN / P23434: Glycine cleavage system H protein, mitochondrial; Lipoic acid-containing protein from Homo sapiens GCSH / P23434: glycine cleavage system H protein, mitochondrial (EC 1.4.1.27) from Homo sapiens	41% id, 73% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory