Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 8 curated entries in PaperBLAST's database that match 'anthranilate synthase component I' as complete word(s).

These curated entries have 8 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_0417: Anthranilate synthase component 1
is similar to:
PaperBLAST

trpE / BAC65122.2: anthranilate synthase component I from Burkholderia multivorans

55% id,
99% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

52% id,
96% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

47% id,
98% cov

More...

PP_2329: aminodeoxychorismate synthase / para-aminobenzoate synthase multi-enzyme complex
is similar to:
PaperBLAST

7bvdA / A0QX93: Anthranilate synthase component i (trpe)[mycolicibacterium smegmatis]

37% id,
91% cov

5cwaA / P9WFX2: Structure of anthranilate synthase component i (trpe) from mycobacterium tuberculosis with inhibitor bound

36% id,
91% cov

trpE / AAD09116.1: anthranilate synthase component I from Rhodobacter sphaeroides

34% id,
91% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory