Searching in Pseudomonas putida KT2440 (Putida)
Found 1 curated entries in PaperBLAST's database that match 'deoxy%ribose dehydrogenase%beta' as complete word(s).
These curated entries have 1 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query
| PP_3622: putative Isoquinoline 1-oxidoreductase, beta subunit is similar to: | PaperBLAST |
C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae | 85% id, 99% cov |
| PP_2478: putative Isoquinoline 1-oxidoreductase, beta subunit is similar to: | PaperBLAST |
C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae | 33% id, 99% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 4117284-4119560 (frame +3) on AE015451 is similar to: | PaperBLAST |
C7A11_18885 / A0A1N7UDX6: 2-deoxy-D-ribose dehydrogenase β subunit from Pseudomonas simiae | 83% id, 100% cov |
Lawrence Berkeley National Laboratory