Curated BLAST for Genomes

 

Curated BLAST

Searching in Pseudomonas putida KT2440 (Putida)

Found 25 curated entries in PaperBLAST's database that match 'sucrose hydrolase' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Pseudomonas putida KT2440, or try another query

PP_4059: fused trehalose synthase B/maltokinase
is similar to:
PaperBLAST

AAM42629.1: sucrose hydrolase (SuxB;XCC3359) (EC 3.2.1.-)

33% id,
52% cov

6lgaA / A0A077JI83: Bombyx mori gh13 sucrose hydrolase

35% id,
49% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

32% id,
51% cov

More...

PP_4053: maltooligosyl trehalose synthase
is similar to:
PaperBLAST

3czkA / Q6UVM5: Crystal structure analysis of sucrose hydrolase(suh) e322q-sucrose complex

36% id,
17% cov

AAM38333.1: sucrose hydrolase (XAC3490) (EC 3.2.1.-)

36% id,
17% cov

AAQ93678.1: sucrose hydrolase (Suh) (EC 3.2.1.-)

36% id,
16% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory