Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 27 curated entries in PaperBLAST's database that match '1.1.1.14' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 13 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1980: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

41% id,
94% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

38% id,
97% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

32% id,
98% cov

More...

Sama_3393: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

34% id,
96% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

33% id,
96% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

33% id,
96% cov

More...

Sama_0517: D-beta-hydroxybutyrate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

32% id,
99% cov

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

31% id,
99% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

30% id,
100% cov

More...

Sama_1381: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

34% id,
93% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

32% id,
98% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

30% id,
97% cov

Sama_1741: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

33% id,
95% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

30% id,
99% cov

Q5FNX9: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Gluconobacter oxydans

30% id,
95% cov

Sama_0097: L-threonine 3-dehydrogenase (RefSeq)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

33% id,
93% cov

Q5I6M3: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Malus domestica

31% id,
97% cov

Q3C2L6: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Solanum lycopersicum

32% id,
92% cov

More...

Sama_2250: acetoacetyl-CoA reductase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

30% id,
93% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

28% id,
67% cov

Sama_2121: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

PS417_11520: Sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas simiae

27% id,
96% cov

SDH_CERSP / Q59787: Sorbitol dehydrogenase; SDH; Galactitol 2-dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; EC 1.1.1.-; EC 1.1.1.16; EC 1.1.1.14 from Cereibacter sphaeroides
polS / GI|2338763: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Rhodobacter sphaeroides

28% id,
71% cov

Pf6N2E2_1959: D-sorbitol dehydrogenase (EC 1.1.1.14) from Pseudomonas fluorescens

28% id,
71% cov

Sama_0389: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

29% id,
87% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
76% cov

Sama_1367: short chain dehydrogenase/reductase family oxidoreductase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

26% id,
98% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

28% id,
70% cov

Ac3H11_2940: D-sorbitol 2-dehydrogenase (EC 1.1.1.14) from Acidovorax sp.

27% id,
74% cov

More...

Sama_0004: alcohol dehydrogenase, zinc-binding (RefSeq)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

26% id,
95% cov

Sama_2709: D-isomer specific 2-hydroxyacid dehydrogenase family protein (RefSeq)
is similar to:
PaperBLAST

DHSO_BACSU / Q06004: Sorbitol dehydrogenase; SDH; Glucitol dehydrogenase; L-iditol 2-dehydrogenase; Polyol dehydrogenase; Xylitol dehydrogenase; EC 1.1.1.-; EC 1.1.1.14; EC 1.1.1.9 from Bacillus subtilis
gutB / GI|304153: L-iditol 2-dehydrogenase; EC 1.1.1.14 from Bacillus subtilis
gutB / Q06004: glucitol dehydrogenase monomer (EC 1.1.1.9; EC 1.1.1.14) from Bacillus subtilis

26% id,
87% cov

Sama_0813: short chain dehydrogenase/reductase family oxidoreductase (RefSeq)
is similar to:
PaperBLAST

Q1J2J0: L-iditol 2-dehydrogenase (EC 1.1.1.14) from Deinococcus geothermalis

31% id,
73% cov

PGA1_c13170: Sorbitol dehydrogenase (EC 1.1.1.14) from Phaeobacter inhibens

29% id,
72% cov

BPHYT_RS16120: sorbitol dehydrogenase, D-fructose forming (EC 1.1.1.14) from Burkholderia phytofirmans

28% id,
73% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory