Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 11 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 11 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_3282: ketol-acid reductoisomerase (RefSeq)
is similar to:

A0KS29: ketol-acid reductoisomerase [NAD(P)+] (EC from Shewanella sp.

89% id,
100% cov

P05793: ketol-acid reductoisomerase [NAD(P)+] (EC; ketol-acid reductoisomerase (NADP+) (EC from Escherichia coli

73% id,
100% cov

ilvC / O27491: acetohydroxy-acid isomeroreductase subunit (EC from Methanothermobacter thermautotrophicus

35% id,
96% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory