Searching in Shewanella amazonensis SB2B (SB2B)
Found 2 curated entries in PaperBLAST's database that match '1.1.1.43' as complete word(s).
These curated entries have 2 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_2949: D-3-phosphoglycerate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 36% id, 88% cov |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 33% id, 90% cov |
Sama_2811: glycerate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 33% id, 89% cov |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 35% id, 80% cov |
Sama_3039: D-isomer specific 2-hydroxyacid dehydrogenase family protein (RefSeq) is similar to: | PaperBLAST |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 32% id, 80% cov |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 30% id, 83% cov |
Sama_0612: D-lactate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
kguD / Q5TM04: 2-dehydro-6-phosphogluconate reductase (EC 1.1.1.43) from Pseudomonas fluorescens | 31% id, 80% cov |
Sama_2153: erythronate-4-phosphate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
BPHYT_RS11290: 2-ketogluconate 6-phosphate reductase (EC 1.1.1.43) from Burkholderia phytofirmans | 30% id, 79% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory