Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 44 curated entries in PaperBLAST's database that match '1.1.1.44' as complete word(s).

These curated entries have 29 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1365: 6-phosphogluconate dehydrogenase (RefSeq) is similar to:	PaperBLAST
6PGD_RAT / P85968: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Rattus norvegicus P85968: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Rattus norvegicus	47% id, 97% cov
6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis	46% id, 99% cov
Q9DCD0: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Mus musculus	47% id, 97% cov
P96789: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Lactococcus lactis	46% id, 98% cov
6PGD_SHEEP / P00349: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Ovis aries	46% id, 97% cov
6PGD_HUMAN / P52209: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Homo sapiens PGD / P52209: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Homo sapiens P52209: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Homo sapiens	46% id, 97% cov
SPBC660.16 / RF\|NP_595095.1: phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Schizosaccharomyces pombe P78812: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Schizosaccharomyces pombe	45% id, 98% cov
6PGD1_YEAST / P38720: 6-phosphogluconate dehydrogenase, decarboxylating 1; EC 1.1.1.44 from Saccharomyces cerevisiae P38720: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Saccharomyces cerevisiae	45% id, 97% cov
A0A0D1CRJ9: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Ustilago maydis	45% id, 96% cov
6PGD2_YEAST / P53319: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Saccharomyces cerevisiae P53319: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Saccharomyces cerevisiae	45% id, 96% cov
GND1: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Candida albicans	47% id, 92% cov
6PGD_ECOLI / P00350: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Escherichia coli Gnd / b2029: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli gnd / P00350: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) from Escherichia coli P00350: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Escherichia coli	43% id, 99% cov
Q762L5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Klebsiella pneumoniae	43% id, 99% cov
Q6NHC5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Corynebacterium glutamicum	43% id, 100% cov
P52208: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Synechocystis sp.	43% id, 97% cov
6PGD_AGGAC / P70718: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Aggregatibacter actinomycetemcomitans	43% id, 96% cov
6PGD3_ARATH / Q9FFR3: 6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana Q9FFR3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	42% id, 99% cov
6PGD1_ARATH / Q9SH69: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana Q9SH69: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	42% id, 99% cov
6PGD1_SPIOL / Q94KU1: 6-phosphogluconate dehydrogenase, decarboxylating 1; EC 1.1.1.44 from Spinacia oleracea	41% id, 98% cov
6PGD2_ARATH / Q9FWA3: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Arabidopsis thaliana Q9FWA3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	40% id, 98% cov
6PGD2_ORYSJ / Q2R480: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; OsG6PGH2; EC 1.1.1.44 from Oryza sativa	42% id, 94% cov
6PGD1_ORYSJ / Q9LI00: 6-phosphogluconate dehydrogenase, decarboxylating 1; OsG6PGH1; EC 1.1.1.44 from Oryza sativa Q9LI00: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Oryza sativa	40% id, 98% cov
Q9WYR9: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Thermotoga maritima	39% id, 99% cov
Q8IKT2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Plasmodium falciparum	38% id, 100% cov
6PGD2_SPIOL / Q94KU2: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; EC 1.1.1.44 from Spinacia oleracea	41% id, 89% cov
Q6WAT5: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Trypanosoma cruzi	36% id, 100% cov
6PGD_TRYBB / P31072: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Trypanosoma brucei	34% id, 99% cov
A0A1J5NX54: phosphogluconate dehydrogenase (NAD+-dependent, decarboxylating) (EC 1.1.1.343); phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica	34% id, 98% cov
Q2RIZ2: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Moorella thermoacetica	33% id, 98% cov
More...

Sama_1975: 2-hydroxy-3-oxopropionate reductase (RefSeq) is similar to:	PaperBLAST
P96789: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Lactococcus lactis	28% id, 50% cov
6PGD2_ARATH / Q9FWA3: 6-phosphogluconate dehydrogenase, decarboxylating 2; EC 1.1.1.44 from Arabidopsis thaliana Q9FWA3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	27% id, 48% cov
6PGD2_ORYSJ / Q2R480: 6-phosphogluconate dehydrogenase, decarboxylating 2, chloroplastic; OsG6PGH2; EC 1.1.1.44 from Oryza sativa	29% id, 45% cov
6PGD_BACSU / P80859: 6-phosphogluconate dehydrogenase, NADP(+)-dependent, decarboxylating; GNTZII; EC 1.1.1.44 from Bacillus subtilis gndA / P80859: 6-phosphogluconate dehydrogenase (decarboxylating) (EC 1.1.1.44) from Bacillus subtilis P80859: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Bacillus subtilis	27% id, 49% cov
6PGD3_ARATH / Q9FFR3: 6-phosphogluconate dehydrogenase, decarboxylating 3, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana Q9FFR3: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	26% id, 48% cov
6PGD1_SPIOL / Q94KU1: 6-phosphogluconate dehydrogenase, decarboxylating 1; EC 1.1.1.44 from Spinacia oleracea	26% id, 48% cov
6PGD_AGGAC / P70718: 6-phosphogluconate dehydrogenase, decarboxylating; EC 1.1.1.44 from Aggregatibacter actinomycetemcomitans	29% id, 44% cov
6PGD1_ARATH / Q9SH69: 6-phosphogluconate dehydrogenase, decarboxylating 1, chloroplastic; EC 1.1.1.44 from Arabidopsis thaliana Q9SH69: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Arabidopsis thaliana	25% id, 48% cov
6PGD1_ORYSJ / Q9LI00: 6-phosphogluconate dehydrogenase, decarboxylating 1; OsG6PGH1; EC 1.1.1.44 from Oryza sativa Q9LI00: phosphogluconate dehydrogenase (NADP+-dependent, decarboxylating) (EC 1.1.1.44) from Oryza sativa	35% id, 9% cov
More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory