Searching in Shewanella amazonensis SB2B (SB2B)
Found 24 curated entries in PaperBLAST's database that match '1.1.1.6' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 12 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_0517: D-beta-hydroxybutyrate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 35% id, 96% cov |
| Sama_2455: alcohol dehydrogenase II (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 37% id, 91% cov |
| Sama_1693: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 34% id, 94% cov |
| Sama_1381: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 32% id, 96% cov |
| Sama_1980: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 32% id, 95% cov |
| Sama_3393: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 31% id, 93% cov |
| Sama_1741: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 28% id, 96% cov |
| Sama_1367: short chain dehydrogenase/reductase family oxidoreductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 28% id, 93% cov |
| Sama_2250: acetoacetyl-CoA reductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 27% id, 94% cov |
| Sama_0389: short chain dehydrogenase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 23% id, 93% cov |
| Sama_0813: short chain dehydrogenase/reductase family oxidoreductase (RefSeq) is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 26% id, 72% cov |
| Sama_1640: alcohol dehydrogenase, iron-containing (RefSeq) is similar to: | PaperBLAST |
ADH1_GEOTN / A4IP64: Long-chain-alcohol dehydrogenase 1; Alcohol dehydrogenase 1; ADH1; Fatty alcohol oxidoreductase 1; Glycerol dehydrogenase; EC 1.1.1.192; EC 1.1.1.6 from Geobacillus thermodenitrificans | 29% id, 56% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1659001-1659978 (frame +1) on 248323 is similar to: | PaperBLAST |
GOLD_LISIN / Q92EU6: NAD-dependent glycerol dehydrogenase; Dha-forming NAD-dependent glycerol dehydrogenase; EC 1.1.1.6 from Listeria innocua | 27% id, 98% cov |
Lawrence Berkeley National Laboratory