Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 11 curated entries in PaperBLAST's database that match '1.1.1.67'.

These curated entries have 9 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1980: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

33% id,
93% cov

Sama_0097: L-threonine 3-dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q83VI5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc pseudomesenteroides

31% id,
95% cov

Q6ECH5: mannitol 2-dehydrogenase (EC 1.1.1.67) from Limosilactobacillus reuteri

31% id,
96% cov

Q8KQG6: mannitol 2-dehydrogenase (EC 1.1.1.67) from Leuconostoc mesenteroides

31% id,
95% cov

More...

Sama_1741: short chain dehydrogenase (RefSeq)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
94% cov

Sama_2250: acetoacetyl-CoA reductase (RefSeq)
is similar to:
PaperBLAST

lxr1 / Q8NK50: D-mannitol 2-dehydrogenase (EC 1.1.1.67) from Hypocrea jecorina

28% id,
92% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory