Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 35 curated entries in PaperBLAST's database that match '1.1.1.86' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_3282: ketol-acid reductoisomerase (RefSeq)
is similar to:
PaperBLAST

ILVC_ECOLI / P05793: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 2; Ketol-acid reductoisomerase type II; EC 1.1.1.86 from Escherichia coli
IlvC / b3774: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86; EC 1.1.1.169) from Escherichia coli
ilvC: ketol-acid reductoisomerase; EC 1.1.1.86 from Escherichia coli
ilvC / P05793: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86; EC 1.1.1.169) from Escherichia coli
P05793: ketol-acid reductoisomerase [NAD(P)+] (EC 1.1.1.383); ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Escherichia coli

73% id,
100% cov

ILVC_SALTY / P05989: Ketol-acid reductoisomerase (NADP(+)); KARI; Acetohydroxy-acid isomeroreductase; AHIR; Alpha-keto-beta-hydroxylacyl reductoisomerase; Ketol-acid reductoisomerase type 2; Ketol-acid reductoisomerase type II; EC 1.1.1.86 from Salmonella typhimurium

73% id,
100% cov

A6TGG1: ketol-acid reductoisomerase (NADP+) (EC 1.1.1.86) from Klebsiella pneumoniae

73% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory