Curated BLAST

Curated BLAST for Genomes

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 42 curated entries in PaperBLAST's database that match '1.1.1.95'.

These curated entries have 28 distinct sequences.

Running ublast with E ≤ 0.01

Found 7 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_3039: D-isomer specific 2-hydroxyacid dehydrogenase family protein (RefSeq) is similar to:	PaperBLAST
Sama_3039: Phosphoglycerate dehydrogenase (EC 1.1.1.95) from Shewanella amazonensis	100% id, 100% cov
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	25% id, 80% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	27% id, 49% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	27% id, 49% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	29% id, 41% cov
H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori	31% id, 36% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	36% id, 31% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	26% id, 41% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	34% id, 30% cov
A0A2R6X868: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Marchantia polymorpha	31% id, 30% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	32% id, 27% cov
More...

Sama_2949: D-3-phosphoglycerate dehydrogenase (RefSeq) is similar to:	PaperBLAST
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	68% id, 100% cov
Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa	66% id, 100% cov
A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri	65% id, 87% cov
U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii	51% id, 91% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	50% id, 88% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	49% id, 88% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	50% id, 64% cov
Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii	34% id, 93% cov
PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis	30% id, 98% cov
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	30% id, 93% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	39% id, 58% cov
H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori	31% id, 71% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	32% id, 67% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus O08651: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Rattus norvegicus	32% id, 67% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	33% id, 64% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	34% id, 58% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	35% id, 55% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	35% id, 53% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	37% id, 50% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	36% id, 51% cov
A0A1Z4EAX4: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Beta vulgaris	34% id, 51% cov
A0A1Z4EAX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Beta vulgaris	31% id, 55% cov
A0A2R6X868: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Marchantia polymorpha	34% id, 50% cov
More...

Sama_2709: D-isomer specific 2-hydroxyacid dehydrogenase family protein (RefSeq) is similar to:	PaperBLAST
cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori	40% id, 99% cov

Sama_0612: D-lactate dehydrogenase (RefSeq) is similar to:	PaperBLAST
O58256: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pyrococcus horikoshii	32% id, 81% cov
Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii	27% id, 92% cov
PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis	33% id, 62% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	30% id, 65% cov
Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa	26% id, 75% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	31% id, 58% cov
H9JRZ9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Bombyx mori	30% id, 59% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	37% id, 45% cov
U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii	28% id, 60% cov
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	28% id, 58% cov
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	29% id, 56% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	34% id, 45% cov
A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri	27% id, 55% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	29% id, 50% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	34% id, 42% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus O08651: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Rattus norvegicus	36% id, 39% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	36% id, 39% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	35% id, 39% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	33% id, 41% cov
A0A1Z4EAX4: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Beta vulgaris	32% id, 41% cov
A0A2R6X868: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Marchantia polymorpha	33% id, 40% cov
A0A1Z4EAX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Beta vulgaris	30% id, 44% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	30% id, 43% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	28% id, 43% cov
More...

Sama_2811: glycerate dehydrogenase (RefSeq) is similar to:	PaperBLAST
Q972A9: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Sulfurisphaera tokodaii	27% id, 81% cov
PGDH1 / A2DLU8: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Trichomonas vaginalis	31% id, 70% cov
SERA_ECOLI / P0A9T0: D-3-phosphoglycerate dehydrogenase; PGDH; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Escherichia coli SerA / b2913: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli serA / RF\|NP_417388: D-3-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Escherichia coli serA / P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95; EC 1.1.1.399) from Escherichia coli P0A9T0: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli C3SVM7: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Escherichia coli	31% id, 67% cov
Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa	29% id, 68% cov
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	29% id, 62% cov
P9WNX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mycobacterium tuberculosis	33% id, 53% cov
Q9Z564: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Streptomyces coelicolor	31% id, 57% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	28% id, 62% cov
A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri	28% id, 60% cov
U3RH61: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Acanthamoeba castellanii	29% id, 57% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	32% id, 50% cov
SERA1_ARATH / O49485: D-3-phosphoglycerate dehydrogenase 1, chloroplastic; Protein EMBRYO SAC DEVELOPMENT ARREST 9; EC 1.1.1.95 from Arabidopsis thaliana O49485: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	33% id, 48% cov
SERA2_ARATH / O04130: D-3-phosphoglycerate dehydrogenase 2, chloroplastic; PGDH; EC 1.1.1.95 from Arabidopsis thaliana O04130: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	33% id, 47% cov
SERA_RAT / O08651: D-3-phosphoglycerate dehydrogenase; 3-PGDH; EC 1.1.1.95 from Rattus norvegicus Phgdh / O08651: 3-phosphoglycerate dehydrogenase subunit (EC 1.1.1.95) from Rattus norvegicus O08651: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Rattus norvegicus	29% id, 52% cov
SERA_HUMAN / O43175: D-3-phosphoglycerate dehydrogenase; 3-PGDH; 2-oxoglutarate reductase; Malate dehydrogenase; EC 1.1.1.95; EC 1.1.1.399; EC 1.1.1.37 from Homo sapiens PHGDH / O43175: D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens O43175: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Homo sapiens	29% id, 52% cov
SERA_MOUSE / Q61753: D-3-phosphoglycerate dehydrogenase; 3-PGDH; A10; EC 1.1.1.95 from Mus musculus Q61753: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Mus musculus	29% id, 52% cov
A0A1Z4EAX3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Beta vulgaris	32% id, 45% cov
A0A1Z4EAX4: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Beta vulgaris	32% id, 46% cov
SERA3_ARATH / Q9LT69: D-3-phosphoglycerate dehydrogenase 3, chloroplastic; EC 1.1.1.95 from Arabidopsis thaliana Q9LT69: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Arabidopsis thaliana	35% id, 41% cov
EhPGDH: D-phosphoglycerate dehydrogenase; EC 1.1.1.95 from Entamoeba histolytica Q76KF5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Entamoeba histolytica	31% id, 43% cov
A0A2R6X868: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Marchantia polymorpha	34% id, 37% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	29% id, 43% cov
More...

Sama_2153: erythronate-4-phosphate dehydrogenase (RefSeq) is similar to:	PaperBLAST
SERA_YEAST / P40054: D-3-phosphoglycerate dehydrogenase 1; 3-PGDH 1; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	27% id, 79% cov
SER33_YEAST / P40510: D-3-phosphoglycerate dehydrogenase 2; 3-PGDH 2; 2-oxoglutarate reductase; EC 1.1.1.95; EC 1.1.1.399 from Saccharomyces cerevisiae	27% id, 77% cov
Q9I6H5: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas aeruginosa	30% id, 69% cov
A4VGK3: phosphoglycerate dehydrogenase (EC 1.1.1.95) from Pseudomonas stutzeri	31% id, 57% cov
serA / GB\|AAC83943.1: phosphoglycerate dehydrogenase; EC 1.1.1.95 from Bacillus subtilis	30% id, 53% cov
Echvi_2777: fused D-3-phosphoglycerate dehydrogenase / phosphoserine phosphatase (EC 1.1.1.95; EC 3.1.3.3) from Echinicola vietnamensis	27% id, 44% cov
More...

Sama_0097: L-threonine 3-dehydrogenase (RefSeq) is similar to:	PaperBLAST
cad / O25732: cinnamyl-alcohol dehydrogenase (EC 1.1.1.2; EC 1.1.1.95; EC 1.1.1.195) from Helicobacter pylori	25% id, 78% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 7 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory