Searching in Shewanella amazonensis SB2B (SB2B)
Found 17 curated entries in PaperBLAST's database that match '1.1.2.3' as complete word(s).
These curated entries have 15 distinct sequences.
Running ublast with E ≤ 0.01
Found 5 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_2441: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
lldE / Q8EGS4: L-lactate dehydrogenase LldE subunit (EC 1.1.2.3) from Shewanella oneidensis | 83% id, 100% cov |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 28% id, 34% cov |
Sama_2442: iron-sulfur cluster-binding protein (RefSeq) is similar to: | PaperBLAST |
lldG / Q8EGS5: L-lactate dehydrogenase iron-sulfur cluster-binding protein LldF (EC 1.1.2.3) from Shewanella oneidensis | 80% id, 97% cov |
DVU_3033 / Q726S3: quinone-dependent L-lactate dehydrogenase large subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 37% id, 56% cov |
Sama_2443: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
lldF / Q8EGS6: L-lactate dehydrogenase LldF subunit (EC 1.1.2.3) from Shewanella oneidensis | 55% id, 99% cov |
DVU_3032 / Q726S4: quinone-dependent L-lactate dehydrogenase small subunit (EC 1.1.2.3) from Desulfovibrio vulgaris | 37% id, 49% cov |
Sama_1832: electron transport complex protein RnfC (RefSeq) is similar to: | PaperBLAST |
lldG / Q8EGS5: L-lactate dehydrogenase iron-sulfur cluster-binding protein LldF (EC 1.1.2.3) from Shewanella oneidensis | 30% id, 26% cov |
Sama_0857: glutamate synthase subunit alpha (RefSeq) is similar to: | PaperBLAST |
SM_b20850: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Sinorhizobium meliloti | 30% id, 21% cov |
W1QKE8: L-lactate dehydrogenase (cytochrome) (EC 1.1.2.3) from Ogataea angusta | 28% id, 19% cov |
CYB2_YEAST / P00175: L-lactate dehydrogenase (cytochrome); Cytochrome b2; Flavocytochrome b2; FCB2; L-lactate ferricytochrome c oxidoreductase; L-LCR; EC 1.1.2.3 from Saccharomyces cerevisiae | 35% id, 14% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory