Searching in Shewanella amazonensis SB2B (SB2B)
Found 11 curated entries in PaperBLAST's database that match '1.1.99.39' as complete word(s).
These curated entries have 7 distinct sequences.
Running ublast with E ≤ 0.01
Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_2071: oxidoreductase, FAD-binding, putative (RefSeq) is similar to: | PaperBLAST |
ydiJ / Q88EH0: (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas putida | 47% id, 100% cov |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 23% id, 61% cov |
D2HDH_RAT / P84850: D-2-hydroxyglutarate dehydrogenase, mitochondrial; EC 1.1.99.39 from Rattus norvegicus | 27% id, 34% cov |
| Sama_2440: iron-sulfur cluster-binding protein (RefSeq) is similar to: | PaperBLAST |
ydiJ / Q88EH0: (R)-2-hydroxyglutarate dehydrogenase (EC 1.1.99.39) from Pseudomonas putida | 23% id, 93% cov |
D2HDH_PSEU5 / A4VGK4: D-2-hydroxyglutarate dehydrogenase; D-2-HG dehydrogenase; D2HGDH; D-malate dehydrogenase; EC 1.1.99.39; EC 1.1.99.- from Pseudomonas stutzeri | 27% id, 61% cov |
D2HDH_XANCL / P0DV35: D-2-hydroxyglutarate dehydrogenase; D2HGDH; EC 1.1.99.39 from Xanthomonas citri | 28% id, 34% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory