Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 22 curated entries in PaperBLAST's database that match '1.14.13.9' as complete word(s).

These curated entries have 14 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2573: 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (RefSeq)
is similar to:
PaperBLAST

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

26% id,
77% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

23% id,
81% cov

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

25% id,
75% cov

More...

Sama_2722: UbiH/UbiF/VisC/COQ6 family ubiquinone biosynthesis hydroxylase (RefSeq)
is similar to:
PaperBLAST

KMO_CYTH3 / Q11PP7: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Cytophaga hutchinsonii
Q11PP7: kynurenine 3-monooxygenase (EC 1.14.13.9) from Cytophaga hutchinsonii

25% id,
75% cov

KMO_MOUSE / Q91WN4: Kynurenine 3-monooxygenase; Kynurenine 3-hydroxylase; EC 1.14.13.9 from Mus musculus
Q91WN4: kynurenine 3-monooxygenase (EC 1.14.13.9) from Mus musculus

26% id,
49% cov

orf19.5443: kynurenine 3-monooxygenase; EC 1.14.13.9 from Candida albicans

26% id,
38% cov

More...

Sama_2173: TPR domain-containing protein (RefSeq)
is similar to:
PaperBLAST

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

23% id,
22% cov

A1Z745: kynurenine 3-monooxygenase (EC 1.14.13.9) from Drosophila melanogaster

29% id,
14% cov

Sama_1724: NADH:flavin oxidoreductase/NADH oxidase (RefSeq)
is similar to:
PaperBLAST

ACDD_ASPCN / A0A2I2F284: Kynurenine 3-monooxygenase acdD; Aspcandine biosynthesis gene cluster protein D; Kynurenine 3-hydroxylase acdD; EC 1.14.13.9 from Aspergillus candidus

27% id,
15% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory