Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 22 curated entries in PaperBLAST's database that match '1.14.16.1'.

These curated entries have 16 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2222: phenylalanine 4-monooxygenase (RefSeq)
is similar to:
PaperBLAST

SO1666: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Shewanella oneidensis

77% id,
96% cov

Pf6N2E2_2630: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

65% id,
99% cov

AO356_03975: Phenylalanine 4-monooxygenase (EC 1.14.16.1) from Pseudomonas fluorescens

65% id,
99% cov

More...

Sama_0898: prephenate dehydratase / chorismate mutase / phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq)
is similar to:
PaperBLAST

PH4H_DICDI / Q54XS1: Phenylalanine-4-hydroxylase; PAH; Phe-4-monooxygenase; Tryptophan 5-hydroxylase; TRH; Tryptophan 5-monooxygenase; EC 1.14.16.1; EC 1.14.16.4 from Dictyostelium discoideum

26% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory