Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 15 curated entries in PaperBLAST's database that match '1.2.1.22'.

These curated entries have 10 distinct sequences.

Running ublast with E ≤ 0.01

Found 14 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2648: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

LADH / A3LNE3: NAD(P)+ L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Scheffersomyces stipitis

43% id,
95% cov

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

35% id,
96% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

34% id,
98% cov

More...

Sama_3435: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

LADH / A3LNE3: NAD(P)+ L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Scheffersomyces stipitis

42% id,
95% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

35% id,
97% cov

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

34% id,
98% cov

More...

Sama_2637: succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq)
is similar to:
PaperBLAST

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

38% id,
98% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

38% id,
98% cov

LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii
MJ1411 / Q58806: lactaldehyde dehydrogenase subunit (EC 1.2.1.22) from Methanocaldococcus jannaschii
Q58806: lactaldehyde dehydrogenase (EC 1.2.1.22) from Methanocaldococcus jannaschii

33% id,
100% cov

More...

Sama_2650: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

34% id,
94% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

31% id,
97% cov

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

30% id,
94% cov

More...

Sama_1376: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

32% id,
100% cov

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

31% id,
97% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

30% id,
97% cov

More...

Sama_3009: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

31% id,
99% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

31% id,
95% cov

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

31% id,
95% cov

More...

Sama_2676: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

31% id,
99% cov

LADH / A3LNE3: NAD(P)+ L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Scheffersomyces stipitis

29% id,
96% cov

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

29% id,
93% cov

More...

Sama_1626: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

31% id,
97% cov

LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii
MJ1411 / Q58806: lactaldehyde dehydrogenase subunit (EC 1.2.1.22) from Methanocaldococcus jannaschii
Q58806: lactaldehyde dehydrogenase (EC 1.2.1.22) from Methanocaldococcus jannaschii

29% id,
97% cov

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

31% id,
87% cov

More...

Sama_2855: coniferyl aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

27% id,
94% cov

ladh / C1DMY3: NAD+-dependent L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Azotobacter vinelandii

31% id,
81% cov

LADH / A3LNE3: NAD(P)+ L-lactaldehyde dehydrogenase (EC 1.2.1.22) from Scheffersomyces stipitis

28% id,
91% cov

More...

Sama_1529: fatty aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDA_ECOLI / P25553: Lactaldehyde dehydrogenase; Aldehyde dehydrogenase A; Glycolaldehyde dehydrogenase; EC 1.2.1.22; EC 1.2.1.21 from Escherichia coli
Ald / b1415: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
aldA / P25553: aldehyde dehydrogenase A (EC 1.2.1.22; EC 1.2.1.21) from Escherichia coli
P25553: lactaldehyde dehydrogenase (EC 1.2.1.22); D-glyceraldehyde dehydrogenase (NADP+) (EC 1.2.1.89) from Escherichia coli

24% id,
85% cov

LADH_METJA / Q58806: Lactaldehyde dehydrogenase; EC 1.2.1.22 from Methanocaldococcus jannaschii
MJ1411 / Q58806: lactaldehyde dehydrogenase subunit (EC 1.2.1.22) from Methanocaldococcus jannaschii
Q58806: lactaldehyde dehydrogenase (EC 1.2.1.22) from Methanocaldococcus jannaschii

23% id,
85% cov

Sama_1980: 3-oxoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

30% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

29% id,
37% cov

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

33% id,
26% cov

Sama_1381: 3-ketoacyl-(acyl-carrier-protein) reductase (RefSeq)
is similar to:
PaperBLAST

rhaEW / P40747: bifunctional L-rhamnulose 1-phosphate aldolase/lactaldehyde dehydrogenase (EC 4.1.2.19; EC 1.2.1.22) from Bacillus subtilis

29% id,
38% cov

SMc02322: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Sinorhizobium meliloti

28% id,
37% cov

Dshi_2436: rhamnulose-1-phosphate aldolase (EC 4.1.2.19) / lactaldehyde dehydrogenase (EC 1.2.1.22) from Dinoroseobacter shibae

32% id,
27% cov

More...

Sama_0517: D-beta-hydroxybutyrate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Echvi_1572: Lactaldehyde dehydrogenase (EC 1.2.1.22); Rhamnulose-1-phosphate aldolase (EC 4.1.2.19) from Echinicola vietnamensis

27% id,
37% cov

Sama_1764: short-chain dehydrogenase/reductase SDR (RefSeq)
is similar to:
PaperBLAST

rhaEW / A9WGG0: bifunctional L-rhamnulose-phosphate aldolase/L-lactaldehyde dehydrogenase (EC 1.2.1.22; EC 4.1.2.19) from Chloroflexus aurantiacus

26% id,
34% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 14 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory