Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 27 curated entries in PaperBLAST's database that match '1.2.1.26'.

These curated entries have 19 distinct sequences.

Running ublast with E ≤ 0.01

Found 11 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1529: fatty aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Ga0059261_1896: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sphingomonas koreensis

45% id,
97% cov

lhpG / Q88NF5: α-ketoglutaric semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Pseudomonas putida

45% id,
96% cov

Q88GW5: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Pseudomonas putida

43% id,
98% cov

More...

Sama_2637: succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq)
is similar to:
PaperBLAST

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

41% id,
98% cov

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

36% id,
98% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

36% id,
98% cov

More...

Sama_2648: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

38% id,
97% cov

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

37% id,
99% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

36% id,
100% cov

More...

Sama_3435: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

37% id,
98% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

36% id,
100% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

36% id,
99% cov

More...

Sama_2650: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

36% id,
97% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

37% id,
94% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

35% id,
98% cov

More...

Sama_3009: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

34% id,
96% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

32% id,
99% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

33% id,
96% cov

More...

Sama_1626: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

34% id,
96% cov

PS417_04200: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas simiae

34% id,
96% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

33% id,
97% cov

More...

Sama_1376: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

KGSDH_HALVD / D4GP41: Alpha-ketoglutarate semialdehyde dehydrogenase; KGSADH; EC 1.2.1.26 from Haloferax volcanii
xacF / D4GP41: α-ketoglutarate semialdehyde dehydrogenase subunit (EC 1.2.1.26) from Haloferax volcanii

32% id,
99% cov

Pf1N1B4_1109: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Pseudomonas fluorescens

33% id,
97% cov

KGSDH_SACS2 / Q97UA1: 2,5-dioxopentanoate dehydrogenase; Aldehyde dehydrogenase T; Alpha-ketoglutaric semialdehyde dehydrogenase AldhT; EC 1.2.1.26 from Saccharolobus solfataricus
dopDH / Q97UA1: 2,5-dioxopentanoate dehydrogenase subunit (EC 1.2.1.26) from Saccharolobus solfataricus
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

32% id,
100% cov

More...

Sama_2676: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

KGSDH_SACS2 / Q97UA1: 2,5-dioxopentanoate dehydrogenase; Aldehyde dehydrogenase T; Alpha-ketoglutaric semialdehyde dehydrogenase AldhT; EC 1.2.1.26 from Saccharolobus solfataricus
dopDH / Q97UA1: 2,5-dioxopentanoate dehydrogenase subunit (EC 1.2.1.26) from Saccharolobus solfataricus
Q97UA1: lactaldehyde dehydrogenase (EC 1.2.1.22); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Saccharolobus solfataricus

31% id,
99% cov

KGSDH_BACSU / P42236: Alpha-ketoglutaric semialdehyde dehydrogenase; alphaKGSA dehydrogenase; 2,5-dioxovalerate dehydrogenase; EC 1.2.1.26 from Bacillus subtilis

32% id,
97% cov

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

31% id,
98% cov

More...

Sama_2855: coniferyl aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

SM_b20891: Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) from Sinorhizobium meliloti

29% id,
93% cov

Ac3H11_612: 2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) from Acidovorax sp.

29% id,
94% cov

KGSD1_AZOBR / Q1JUP4: Alpha-ketoglutaric semialdehyde dehydrogenase 1; alphaKGSA dehydrogenase 1; 2,5-dioxovalerate dehydrogenase 1; 2-oxoglutarate semialdehyde dehydrogenase 1; KGSADH-I; Succinate-semialdehyde dehydrogenase [NAD(+)]; SSDH; EC 1.2.1.26; EC 1.2.1.24 from Azospirillum brasilense
Q1JUP4: succinate-semialdehyde dehydrogenase (NAD+) (EC 1.2.1.24); 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Azospirillum brasilense

28% id,
88% cov

More...

Sama_1693: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

xylA / A0A0H3C801: 2,5-dioxovalerate dehydrogenase (EC 1.2.1.26) from Caulobacter vibrioides

22% id,
53% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 10 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory