Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 183 curated entries in PaperBLAST's database that match '1.2.1.3'.

These curated entries have 135 distinct sequences.

Running ublast with E ≤ 0.01

Found 25 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_3435: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

Psest_2276: Aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas stutzeri

73% id,
100% cov

pedI / B1N7J6: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Pseudomonas putida

72% id,
100% cov

BWI76_RS21985: acetaldehyde dehydrogenase (EC 1.2.1.3) from Klebsiella michiganensis

71% id,
100% cov

More...

Sama_1693: bifunctional acetaldehyde-CoA/alcohol dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

59% id,
100% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

48% id,
97% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

48% id,
97% cov

More...

Sama_3009: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

59% id,
98% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

33% id,
94% cov

AL2C4_ARATH / Q56YU0: Aldehyde dehydrogenase family 2 member C4; ALDH1a; Protein REDUCED EPIDERMAL FLUORESCENCE 1; EC 1.2.1.3 from Arabidopsis thaliana

32% id,
96% cov

More...

Sama_1626: succinylglutamic semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

P76217: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Escherichia coli

56% id,
98% cov

pdh / Q5P171: phenylacetaldehyde dehydrogenase monomer (EC 1.2.1.39) from Aromatoleum aromaticum
Q5P171: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Aromatoleum aromaticum

34% id,
92% cov

A0A1U7EWW7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Natronomonas pharaonis

33% id,
92% cov

More...

Sama_2637: succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq)
is similar to:
PaperBLAST

P51650: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Rattus norvegicus

54% id,
91% cov

AL1A1_MOUSE / P24549: Aldehyde dehydrogenase 1A1; 3-deoxyglucosone dehydrogenase; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A1; Aldehyde dehydrogenase, cytosolic; Retinal dehydrogenase 1; RALDH 1; RalDH1; EC 1.2.1.19; EC 1.2.1.28; EC 1.2.1.3; EC 1.2.1.36 from Mus musculus
P24549: retinal dehydrogenase (EC 1.2.1.36) from Mus musculus

40% id,
95% cov

AL1A7_MOUSE / O35945: Aldehyde dehydrogenase, cytosolic 1; ALDH class 1; ALDH-E1; ALHDII; Aldehyde dehydrogenase family 1 member A7; Aldehyde dehydrogenase phenobarbital-inducible; EC 1.2.1.3 from Mus musculus
O35945: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

39% id,
95% cov

More...

Sama_0256: N-acetyl-gamma-glutamyl-phosphate reductase (RefSeq)
is similar to:
PaperBLAST

ARGC_ECOLI / P11446: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Escherichia coli
ArgC / b3958: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Escherichia coli
argC / P11446: N-acetylglutamylphosphate reductase (EC 1.2.1.38) from Escherichia coli
P11446: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Escherichia coli

49% id,
98% cov

ARGC_GEOSE / Q07906: N-acetyl-gamma-glutamyl-phosphate reductase; AGPR; N-acetyl-glutamate semialdehyde dehydrogenase; NAGSA dehydrogenase; EC 1.2.1.38 from Geobacillus stearothermophilus

40% id,
96% cov

P9WPZ9: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) from Mycobacterium tuberculosis

35% id,
93% cov

More...

Sama_2648: aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDH4_BACSU / O34660: Putative aldehyde dehydrogenase DhaS; EC 1.2.1.3 from Bacillus subtilis

45% id,
98% cov

P11884: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Rattus norvegicus

46% id,
92% cov

P47738: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Mus musculus

46% id,
92% cov

More...

Sama_2855: coniferyl aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ALDH_PSEOL / P12693: Aldehyde dehydrogenase; EC 1.2.1.3 from Pseudomonas oleovorans
alkH / P12693: aldehyde dehydrogenase (EC 1.2.1.3) from Pseudomonas oleovorans

39% id,
96% cov

AL3B2_HUMAN / P48448: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Homo sapiens

39% id,
97% cov

AL3B2_MOUSE / E9Q3E1: Aldehyde dehydrogenase family 3 member B2; Aldehyde dehydrogenase 8; EC 1.2.1.3 from Mus musculus

37% id,
97% cov

More...

Sama_2650: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

34% id,
98% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

33% id,
94% cov

ALDH2_YEAST / P47771: Aldehyde dehydrogenase [NAD(P)+] 1; EC 1.2.1.3 from Saccharomyces cerevisiae
ALD2 / P47771: aldehyde dehydrogenase (EC 1.2.1.8; EC 1.2.1.3) from Saccharomyces cerevisiae

33% id,
95% cov

More...

Sama_2676: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq)
is similar to:
PaperBLAST

YdbG / b1385: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
feaB / P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli
P80668: phenylacetaldehyde dehydrogenase (EC 1.2.1.39) from Escherichia coli

33% id,
99% cov

FUS7_GIBF5 / S0ENH1: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella fujikuroi

31% id,
97% cov

FUS7_GIBM7 / W7MWX4: Putative aldehyde dehydrogenase FUS7; Fusarin biosynthesis protein 7; EC 1.2.1.3 from Gibberella moniliformis

32% id,
95% cov

More...

Sama_1376: methylmalonate-semialdehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

AL1A3_MOUSE / Q9JHW9: Retinaldehyde dehydrogenase 3; RALDH-3; RalDH3; Aldehyde dehydrogenase 6; Aldehyde dehydrogenase family 1 member A3; Aldh1a3; EC 1.2.1.36 from Mus musculus
Q9JHW9: retinal dehydrogenase (EC 1.2.1.36); aldehyde dehydrogenase [NAD(P)+] (EC 1.2.1.5) from Mus musculus

33% id,
94% cov

Q8K4D8: retinal dehydrogenase (EC 1.2.1.36) from Rattus norvegicus

33% id,
94% cov

Q0H2G3: retinal dehydrogenase (EC 1.2.1.36) from Danio rerio

33% id,
95% cov

More...

Sama_0004: alcohol dehydrogenase, zinc-binding (RefSeq)
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

31% id,
95% cov

Sama_0097: L-threonine 3-dehydrogenase (RefSeq)
is similar to:
PaperBLAST

ADH_CUPNH / Q0KDL6: Alcohol dehydrogenase; EC 1.1.1.1; EC 1.1.1.4; EC 1.2.1.3 from Cupriavidus necator

29% id,
96% cov

Sama_1529: fatty aldehyde dehydrogenase (RefSeq)
is similar to:
PaperBLAST

geoB / H1ZV37: geranial dehydrogenase (EC 1.2.1.3; EC 1.2.1.86) from Castellaniella defragrans

27% id,
88% cov

ALDH_DAVTA / P40108: Aldehyde dehydrogenase; ALDDH; ALDH; Allergen Cla h 3; Allergen Cla h III; Allergen Cla h 10; EC 1.2.1.3 from Davidiella tassiana

25% id,
93% cov

Q92UV7: aldehyde dehydrogenase (NAD+) (EC 1.2.1.3) from Sinorhizobium meliloti

24% id,
91% cov

More...

Sama_2455: alcohol dehydrogenase II (RefSeq)
is similar to:
PaperBLAST

ADHE_CLOAB / P33744: Aldehyde-alcohol dehydrogenase; AAD; EC 1.1.1.1; EC 1.2.1.3 from Clostridium acetobutylicum

32% id,
47% cov

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

35% id,
43% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

35% id,
43% cov

Sama_3571: AMP-binding family protein (RefSeq)
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

27% id,
46% cov

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

27% id,
46% cov

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

26% id,
44% cov

More...

Sama_0261: AMP-dependent synthetase and ligase (RefSeq)
is similar to:
PaperBLAST

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

28% id,
35% cov

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

28% id,
35% cov

Sama_0257: acetylglutamate kinase (RefSeq)
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

28% id,
29% cov

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

27% id,
29% cov

Sama_0330: N-acetylglutamate synthase (RefSeq)
is similar to:
PaperBLAST

ARG56_YEAST / Q01217: Protein ARG5,6, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Saccharomyces cerevisiae

22% id,
32% cov

ARG56_SCHPO / P31318: Protein arg11, mitochondrial; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe
arg11 / GI|1204210: N-acetyl-gamma-glutamyl-phosphate reductase/acetylglutamate kinase; EC 1.2.1.38; EC 2.7.2.8 from Schizosaccharomyces pombe

23% id,
29% cov

Sama_1184: peptide synthase (RefSeq)
is similar to:
PaperBLAST

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

24% id,
27% cov

Sama_2897: long-chain-fatty-acid--CoA ligase (RefSeq)
is similar to:
PaperBLAST

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

29% id,
19% cov

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

28% id,
20% cov

B2HN69: carboxylate reductase (NADP+) (EC 1.2.1.30) from Mycobacterium marinum

26% id,
19% cov

Sama_2515: gamma-glutamyl phosphate reductase (RefSeq)
is similar to:
PaperBLAST

ADHE_STRPN / A0A0H2URT2: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

27% id,
18% cov

ADHE_STRP2 / A0A0H2ZM56: Aldehyde-alcohol dehydrogenase; EC 1.1.1.1; EC 1.2.1.3 from Streptococcus pneumoniae

27% id,
18% cov

Sama_1364: acyl-coenzyme A synthetase/AMP-(fatty) acid ligase (RefSeq)
is similar to:
PaperBLAST

CAR_NEUCR / Q7RW48: Carboxylic acid reductase; CAR; Aryl aldehyde:NADP oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Neurospora crassa
Q7RW48: carboxylate reductase (NADP+) (EC 1.2.1.30) from Neurospora crassa

30% id,
13% cov

Sama_1934: long-chain-fatty-acid--CoA ligase (RefSeq)
is similar to:
PaperBLAST

CAR_NOCIO / Q6RKB1: Carboxylic acid reductase; CAR; ATP/NADPH-dependent carboxylic acid reductase; Aryl aldehyde oxidoreductase; EC 1.2.1.-; EC 1.2.1.30 from Nocardia iowensis
car / Q6RKB1: carboxylic acid reductase (EC 1.2.1.30) from Nocardia iowensis
Q6RKB1: carboxylate reductase (NADP+) (EC 1.2.1.30) from Nocardia iowensis

27% id,
14% cov

D6Z860: carboxylate reductase (NADP+) (EC 1.2.1.30) from Segniliparus rotundus

31% id,
11% cov

Sama_2079: acetyl-CoA synthetase (RefSeq)
is similar to:
PaperBLAST

LYS2_YEAST / P07702: L-2-aminoadipate reductase; Alpha-aminoadipate reductase; Alpha-AR; L-aminoadipate-semialdehyde dehydrogenase; EC 1.2.1.31; EC 1.2.1.95 from Saccharomyces cerevisiae

32% id,
5% cov

Q8NJ21: L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31) from Kluyveromyces lactis

32% id,
5% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 23 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory