Searching in Shewanella amazonensis SB2B (SB2B)
Found 10 curated entries in PaperBLAST's database that match '1.2.1.71' as complete word(s).
These curated entries have 6 distinct sequences.
Running ublast with E ≤ 0.01
Found 9 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_3009: succinylglutamic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 100% id, 100% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 83% id, 100% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 61% id, 100% cov |
| Sama_1626: succinylglutamic semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 67% id, 100% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 67% id, 99% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 61% id, 100% cov |
| Sama_2637: succinate-semialdehyde dehydrogenase (NAD(P)(+)) (RefSeq) is similar to: | PaperBLAST |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 34% id, 94% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 34% id, 94% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 33% id, 93% cov |
| Sama_2648: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 34% id, 94% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 33% id, 94% cov |
SO0619: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella oneidensis | 32% id, 94% cov |
| Sama_3435: aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 31% id, 93% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 31% id, 93% cov |
PfGW456L13_1974: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Pseudomonas fluorescens | 31% id, 92% cov |
| Sama_2676: bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 31% id, 91% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 30% id, 91% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 30% id, 92% cov |
| Sama_2650: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 28% id, 97% cov |
ASTD_PSEAE / O50174: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Pseudomonas aeruginosa | 30% id, 91% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 28% id, 97% cov |
| Sama_1376: methylmalonate-semialdehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 29% id, 87% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 27% id, 89% cov |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 27% id, 87% cov |
| Sama_2855: coniferyl aldehyde dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ASTD_ECOLI / P76217: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Escherichia coli | 29% id, 89% cov |
ASTD_SALTY / Q8ZPV0: N-succinylglutamate 5-semialdehyde dehydrogenase; Succinylglutamic semialdehyde dehydrogenase; SGSD; EC 1.2.1.71 from Salmonella typhimurium | 28% id, 85% cov |
Sama_3009: Succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71) from Shewanella amazonensis | 31% id, 66% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 9 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory