Searching in Shewanella amazonensis SB2B (SB2B)
Found 13 curated entries in PaperBLAST's database that match '1.3.1.12' as complete word(s).
These curated entries have 12 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_0376: dihydrolipoamide acetyltransferase (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 71% id, 100% cov |
| Sama_0894: bifunctional chorismate mutase/prephenate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli | 58% id, 100% cov |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 54% id, 98% cov |
J9XQS6: prephenate dehydrogenase (EC 1.3.1.12) from uncultured bacterium | 29% id, 94% cov |
| Sama_1711: dihydrolipoamide acetyltransferase (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 35% id, 81% cov |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 41% id, 18% cov |
| Sama_1428: 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 34% id, 67% cov |
| Sama_0898: prephenate dehydratase / chorismate mutase / phospho-2-dehydro-3-deoxyheptonate aldolase (RefSeq) is similar to: | PaperBLAST |
O30012: prephenate dehydrogenase (EC 1.3.1.12); prephenate dehydratase (EC 4.2.1.51); chorismate mutase (EC 5.4.99.5) from Archaeoglobus fulgidus | 30% id, 57% cov |
P43902: prephenate dehydrogenase (EC 1.3.1.12) from Haemophilus influenzae | 23% id, 33% cov |
TyrA / b2600: fused chorismate mutase/prephenate dehydrogenase (EC 5.4.99.5; EC 1.3.1.12) from Escherichia coli | 27% id, 22% cov |
| Sama_1359: 3-methylcrotonyl-CoA carboxylase alpha subunit (RefSeq) is similar to: | PaperBLAST |
P06959: pyruvate dehydrogenase system (EC 1.2.1.104); prephenate dehydrogenase (EC 1.3.1.12); dihydrolipoyllysine-residue acetyltransferase (EC 2.3.1.12) from Escherichia coli | 39% id, 12% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory