Searching in Shewanella amazonensis SB2B (SB2B)
Found 23 curated entries in PaperBLAST's database that match '1.4.3.3' as complete word(s).
These curated entries have 20 distinct sequences.
Running ublast with E ≤ 0.01
Found 3 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_1533: D-amino-acid dehydrogenase (RefSeq) is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 31% id, 99% cov |
P80324: D-amino-acid oxidase (EC 1.4.3.3) from Rhodotorula toruloides | 42% id, 9% cov |
Sama_2155: glycine/D-amino acid oxidase (deaminating)-like protein (RefSeq) is similar to: | PaperBLAST |
Q6R4Q9: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 47% id, 13% cov |
Q99042: D-amino-acid oxidase (EC 1.4.3.3) from Trigonopsis variabilis | 47% id, 13% cov |
Sama_2638: putative oxidoreductase (RefSeq) is similar to: | PaperBLAST |
amaD / Q88GX1: D-lysine oxidase (EC 1.4.3.3) from Pseudomonas putida | 40% id, 12% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 2 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory