Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 30 curated entries in PaperBLAST's database that match '1.5.1.2' as complete word(s).

These curated entries have 25 distinct sequences.

Running ublast with E ≤ 0.01

Found 1 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2478: pyrroline-5-carboxylate reductase (RefSeq)
is similar to:
PaperBLAST

Shew_1136: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Shewanella loihica

60% id,
100% cov

P5CR_PSEAE / P22008: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Pseudomonas aeruginosa

41% id,
99% cov

P5CR_ECOLI / P0A9L8: Pyrroline-5-carboxylate reductase; P5C reductase; P5CR; PCA reductase; EC 1.5.1.2 from Escherichia coli
ProC / b0386: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli
proC / P0A9L8: pyrroline-5-carboxylate reductase (EC 1.5.1.2) from Escherichia coli

39% id,
100% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 1 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory