Curated BLAST
Searching in Shewanella amazonensis SB2B (SB2B)
Found 63 curated entries in PaperBLAST's database that match '2.4.2.1' as complete word(s).
These curated entries have 44 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_0976: purine nucleoside phosphorylase (RefSeq)
is similar to: | PaperBLAST |
DEOD_SALTY / Q8ZJV7: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Salmonella typhimurium | 72% id,
98% cov |
DEOD_ECOLI / P0ABP8: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Escherichia coli
Pup / b4384: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli
deoD / RF|NP_418801: purine nucleoside phosphorylase deoD-type; EC 2.4.2.1 from Escherichia coli
deoD / P0ABP8: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli | 71% id,
98% cov |
C8CPR9: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pseudoalteromonas sp. | 62% id,
100% cov |
deoD: purine nucleoside phosphorylase; EC 2.4.2.1 from Bacillus anthracis | 62% id,
98% cov |
P77835: purine-nucleoside phosphorylase (EC 2.4.2.1) from Geobacillus stearothermophilus | 58% id,
98% cov |
O34925: purine-nucleoside phosphorylase (EC 2.4.2.1) from Bacillus subtilis | 59% id,
98% cov |
P56463: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori | 53% id,
98% cov |
DEOD_MYCGE / P47295: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Mycoplasma genitalium | 39% id,
99% cov |
Q72IR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus | 36% id,
100% cov |
A0A518Y5Z2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Helicobacter pylori | 52% id,
35% cov |
More... |
Sama_2604: hypothetical protein (RefSeq)
is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli
yfiH / P33644: purine nucleoside phosphorylase YfiH (EC 2.4.2.1; EC 2.4.2.28; EC 3.5.4.4; EC 1.10.3.2) from Escherichia coli | 55% id,
98% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 36% id,
94% cov |
PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic | 30% id,
94% cov |
PURNU_BACTN / Q89ZI8: Purine nucleoside phosphorylase BT_4389; Adenosine deaminase BT_4389; S-methyl-5'-thioadenosine phosphorylase BT_4389; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Bacteroides thetaiotaomicron | 31% id,
89% cov |
LACC1_MOUSE / Q8BZT9: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Mus musculus | 27% id,
53% cov |
LACC1_HUMAN / Q8IV20: Purine nucleoside phosphorylase LACC1; Adenosine deaminase LACC1; Fatty acid metabolism-immunity nexus; Guanosine phosphorylase LACC1; Laccase domain-containing protein 1; S-methyl-5'-thioadenosine phosphorylase LACC1; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Homo sapiens | 27% id,
53% cov |
More... |
Sama_3424: hypothetical protein (RefSeq)
is similar to: | PaperBLAST |
PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2 from Escherichia coli
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli
ppnP / P0C037: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.2; EC 2.4.2.1) from Escherichia coli | 41% id,
99% cov |
Sama_0412: uridine phosphorylase (RefSeq)
is similar to: | PaperBLAST |
Q72IR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Thermus thermophilus | 32% id,
94% cov |
PNPH_SACS2 / P50389: Purine nucleoside phosphorylase; PNP; 5'-methylthioadenosine phosphorylase I; MTA phosphorylase I; MTAPI; EC 2.4.2.1; EC 2.4.2.28 from Saccharolobus solfataricus | 36% id,
82% cov |
C8CPR9: purine-nucleoside phosphorylase (EC 2.4.2.1) from Pseudoalteromonas sp. | 28% id,
96% cov |
PNP: purine nucleoside phosphorylase; EC 2.4.2.1 from Toxoplasma gondii
Q2HXR2: purine-nucleoside phosphorylase (EC 2.4.2.1) from Toxoplasma gondii | 34% id,
77% cov |
DEOD_ECOLI / P0ABP8: Purine nucleoside phosphorylase DeoD-type; PNP; EC 2.4.2.1 from Escherichia coli
Pup / b4384: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli
deoD / RF|NP_418801: purine nucleoside phosphorylase deoD-type; EC 2.4.2.1 from Escherichia coli
deoD / P0ABP8: purine nucleoside phosphorylase (EC 2.4.2.15; EC 2.4.2.1) from Escherichia coli | 30% id,
87% cov |
Q9YDC0: purine-nucleoside phosphorylase (EC 2.4.2.1) from Aeropyrum pernix | 28% id,
93% cov |
PNPH_PLAVS / A5K9M4: Purine nucleoside phosphorylase; PvPNP; EC 2.4.2.1 from Plasmodium vivax | 30% id,
76% cov |
PNPH_PLAF7 / Q8I3X4: Purine nucleoside phosphorylase; PfPNP; S-methyl-5'-thioinosine phosphorylase; EC 2.4.2.1; EC 2.4.2.44 from Plasmodium falciparum
PNPH_PLAFA / Q8T9Z7: Purine nucleoside phosphorylase; S-methyl-5'-thioinosine phosphorylase; EC 2.4.2.1; EC 2.4.2.44 from Plasmodium falciparum
PNP / Q8T9Z7: purine nucleoside phosphorylase monomer (EC 2.4.2.44; EC 2.4.2.1) from Plasmodium falciparum
Q8I3X4: purine-nucleoside phosphorylase (EC 2.4.2.1); uridine phosphorylase (EC 2.4.2.3) from Plasmodium falciparum
Q8T9Z7: purine-nucleoside phosphorylase (EC 2.4.2.1) from Plasmodium falciparum | 28% id,
76% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 6 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory