Searching in Shewanella amazonensis SB2B (SB2B)
Found 120 curated entries in PaperBLAST's database that match '2.4.2.2'.
These curated entries have 82 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_2193: queuine tRNA-ribosyltransferase (RefSeq) is similar to: | PaperBLAST |
TGT_ECOLI / P0A847: Queuine tRNA-ribosyltransferase; Guanine insertion enzyme; tRNA-guanine transglycosylase; EC 2.4.2.29 from Escherichia coli | 83% id, 99% cov |
Q54177: tRNA-guanosine34 preQ1 transglycosylase (EC 2.4.2.29) from Shigella flexneri | 82% id, 99% cov |
tgt / Q183P1: preQ1 tRNA-ribosyltransferase (EC 2.4.2.29) from Clostridioides difficile | 56% id, 99% cov |
| Sama_0412: uridine phosphorylase (RefSeq) is similar to: | PaperBLAST |
Udp / b3831: uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli | 79% id, 99% cov |
TK1479 / Q5JJC1: uridine phosphorylase (EC 2.4.2.2) from Thermococcus kodakarensis | 44% id, 83% cov |
Q5XA29: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Streptococcus pyogenes | 38% id, 93% cov |
| Sama_0974: thymidine phosphorylase (RefSeq) is similar to: | PaperBLAST |
Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 67% id, 100% cov |
A0A0E2M090: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Lacticaseibacillus paracasei | 45% id, 99% cov |
PDP_BACSU / P39142: Pyrimidine-nucleoside phosphorylase; PYNP; Py-NPase; EC 2.4.2.2 from Bacillus subtilis | 44% id, 97% cov |
| Sama_2604: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
PURNU_ECOLI / P33644: Purine nucleoside phosphorylase YfiH; Adenosine deaminase YfiH; Polyphenol oxidase YfiH; S-methyl-5'-thioadenosine phosphorylase YfiH; EC 2.4.2.1; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.28 from Escherichia coli | 55% id, 98% cov |
PURNU_GEOS3 / P84138: Purine nucleoside phosphorylase YlmD; Adenosine deaminase YlmD; S-methyl-5'-thioadenosine phosphorylase YlmD; EC 2.4.2.1; EC 3.5.4.4; EC 2.4.2.28 from Geobacillus stearothermophilus | 36% id, 94% cov |
PURNU_UNKP / Q1EIR0: Adenosine deaminase RL5; Laccase RL5; Multicopper oxidase RL5; Polyphenol oxidase; Purine nucleoside phosphorylase RL5; S-methyl-5'-thioadenosine phosphorylase RL5; EC 3.5.4.4; EC 1.10.3.-; EC 2.4.2.1; EC 2.4.2.28 from Unknown prokaryotic | 30% id, 94% cov |
| Sama_3424: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
A0A080UUN2: pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) from Serratia marcescens | 43% id, 97% cov |
PPNP_ECOLI / P0C037: Pyrimidine/purine nucleoside phosphorylase; Adenosine phosphorylase; Cytidine phosphorylase; Guanosine phosphorylase; Inosine phosphorylase; Thymidine phosphorylase; Uridine phosphorylase; Xanthosine phosphorylase; EC 2.4.2.1; EC 2.4.2.2 from Escherichia coli | 41% id, 99% cov |
| Sama_0762: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (RefSeq) is similar to: | PaperBLAST |
cobT / A0A0K1TPX5: nicotinate-nucleotide--5-methoxybenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Moorella thermoacetica | 42% id, 94% cov |
cobT / P29935: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase subunit (EC 2.4.2.21) from Sinorhizobium sp. | 42% id, 91% cov |
COBT_SALTY / Q05603: Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; NN:DBI PRT; N(1)-alpha-phosphoribosyltransferase; EC 2.4.2.21 from Salmonella typhimurium | 39% id, 95% cov |
| Sama_0771: hypoxanthine phosphoribosyltransferase (RefSeq) is similar to: | PaperBLAST |
HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus | 35% id, 93% cov |
HGXR_PLAFG / P20035: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Plasmodium falciparum | 33% id, 78% cov |
Q8IJS1: xanthine phosphoribosyltransferase (EC 2.4.2.22); hypoxanthine phosphoribosyltransferase (EC 2.4.2.8) from Plasmodium falciparum | 33% id, 78% cov |
| Sama_0976: purine nucleoside phosphorylase (RefSeq) is similar to: | PaperBLAST |
Udp / b3831: uridine phosphorylase (EC 2.4.2.2; EC 2.4.2.3) from Escherichia coli | 31% id, 94% cov |
TK1479 / Q5JJC1: uridine phosphorylase (EC 2.4.2.2) from Thermococcus kodakarensis | 32% id, 82% cov |
| Sama_0855: adenosylhomocysteine nucleosidase (RefSeq) is similar to: | PaperBLAST |
Q7XA67: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28); adenosylhomocysteine nucleosidase (EC 3.2.2.9) from Arabidopsis thaliana | 28% id, 85% cov |
Q9T0I8: S-methyl-5'-thioadenosine phosphorylase (EC 2.4.2.28); adenosylhomocysteine nucleosidase (EC 3.2.2.9) from Arabidopsis thaliana | 27% id, 64% cov |
| Sama_2131: anthranilate phosphoribosyltransferase (RefSeq) is similar to: | PaperBLAST |
TYMP / P19971: thymidine phosphorylase monomer (EC 2.4.2.3; EC 2.4.2.2) from Homo sapiens | 26% id, 64% cov |
| Sama_2969: nitroreductase (RefSeq) is similar to: | PaperBLAST |
D7GJ95: aerobic 5,6-dimethylbenzimidazole synthase (EC 1.13.11.79); nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) from Propionibacterium freudenreichii | 31% id, 10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 10 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 954797-955384 (frame +2) on 248323 is similar to: | PaperBLAST |
HGXR_TRIFO / P51900: Hypoxanthine-guanine-xanthine phosphoribosyltransferase; HGPRT; HGXPRT; HGXPRTase; EC 2.4.2.22; EC 2.4.2.8 from Tritrichomonas foetus | 35% id, 96% cov |
Lawrence Berkeley National Laboratory