Searching in Shewanella amazonensis SB2B (SB2B)
Found 66 curated entries in PaperBLAST's database that match '2.4.2.4'.
These curated entries have 40 distinct sequences.
Running ublast with E ≤ 0.01
Found 6 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_0974: thymidine phosphorylase (RefSeq) is similar to: | PaperBLAST |
Q7CP66: thymidine phosphorylase (EC 2.4.2.4) from Salmonella enterica | 67% id, 100% cov |
Ttg / b4382: thymidine phosphorylase (EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 67% id, 100% cov |
TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens | 39% id, 90% cov |
| Sama_3424: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
PpnP / b0391: nucleoside phosphorylase PpnP (EC 2.4.2.15; EC 2.4.2.1; EC 2.4.2.2; EC 2.4.2.4; EC 2.4.2.3) from Escherichia coli | 41% id, 99% cov |
| Sama_0412: uridine phosphorylase (RefSeq) is similar to: | PaperBLAST |
PNPH_PLAF7 / Q8I3X4: Purine nucleoside phosphorylase; PfPNP; S-methyl-5'-thioinosine phosphorylase; EC 2.4.2.1; EC 2.4.2.44 from Plasmodium falciparum | 28% id, 76% cov |
| Sama_2193: queuine tRNA-ribosyltransferase (RefSeq) is similar to: | PaperBLAST |
Q8THU2: tRNA-guanosine34 preQ1 transglycosylase (subunit 2/2) (EC 2.4.2.29); tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Methanosarcina acetivorans | 26% id, 68% cov |
ATGT_HALVD / Q9C4M3: tRNA-guanine(15) transglycosylase; 7-cyano-7-deazaguanine tRNA-ribosyltransferase; Archaeal tRNA-guanine transglycosylase; EC 2.4.2.48 from Haloferax volcanii | 27% id, 66% cov |
Q9HI54: tRNA-guanine15 transglycosylase (EC 2.4.2.48) from Thermoplasma acidophilum | 25% id, 53% cov |
| Sama_0114: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
ABF11690.1: 4-amino-4-deoxy-L-arabinosyltransferase (ArnT;ArnTCm;Rmet_4828) (EC 2.4.2.43) | 27% id, 64% cov |
| Sama_2131: anthranilate phosphoribosyltransferase (RefSeq) is similar to: | PaperBLAST |
TYPH_HUMAN / P19971: Thymidine phosphorylase; TP; Gliostatin; Platelet-derived endothelial cell growth factor; PD-ECGF; TdRPase; EC 2.4.2.4 from Homo sapiens | 26% id, 64% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 5 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory