Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 80 curated entries in PaperBLAST's database that match '2.5.1.47' as complete word(s).

These curated entries have 59 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1508: cysteine synthase A (RefSeq)
is similar to:
PaperBLAST

CYSK_ECOLI / P0ABK5: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; S-carboxymethylcysteine synthase; Sulfate starvation-induced protein 5; SSI5; EC 2.5.1.47; EC 4.5.1.5 from Escherichia coli
Ssi5 / b2414: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1; EC 4.4.1.28) from Escherichia coli
cysK / P0ABK5: cysteine synthase A (EC 2.5.1.47; EC 4.4.1.1) from Escherichia coli
P0ABK5: cysteine synthase (EC 2.5.1.47) from Escherichia coli

77% id,
100% cov

CYSK_SALTY / P0A1E3: Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine sulfhydrylase A; EC 2.5.1.47 from Salmonella typhimurium
P0A1E3: cysteine synthase (EC 2.5.1.47) from Salmonella enterica

76% id,
100% cov

P45040: cysteine synthase (EC 2.5.1.47) from Haemophilus influenzae

75% id,
99% cov

More...

Sama_1824: pyridoxal-5'-phosphate-dependent enzyme, beta subunit (RefSeq)
is similar to:
PaperBLAST

F9UT54: cysteine synthase (EC 2.5.1.47); cystathionine beta-synthase (EC 4.2.1.22) from Lactiplantibacillus plantarum

29% id,
94% cov

DCSD_STRLA / D2Z027: O-ureido-L-serine synthase; Cysteine synthase homolog DscD; O-acetylserine sulfhydrylase; EC 2.6.99.3; EC 2.5.1.47 from Streptomyces lavendulae
dcsD / D2Z027: O-ureido-L-serine synthase (EC 2.5.1.47; EC 2.6.99.3) from Streptomyces lavendulae
D2Z027: cysteine synthase (EC 2.5.1.47); O-ureido-L-serine synthase (EC 2.6.99.3) from Streptomyces lavendulae

26% id,
94% cov

CYSK_MYCTU / P9WP55: O-acetylserine sulfhydrylase; OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase; EC 2.5.1.47 from Mycobacterium tuberculosis
P9WP55: cysteine synthase (EC 2.5.1.47) from Mycobacterium tuberculosis

26% id,
95% cov

More...

Sama_3278: threonine dehydratase (RefSeq)
is similar to:
PaperBLAST

CYSC_SPIOL / Q43153: Bifunctional L-3-cyanoalanine synthase/cysteine synthase, mitochondrial; Beta-cyanoalanine synthase; SoCAS; Beta-substituted Ala synthase 3-1; SPIol-Bsas3-1; Cysteine synthase C; EC 2.5.1.47; EC 4.4.1.9 from Spinacia oleracea

28% id,
84% cov

CAS1_SOLTU / Q76MX2: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum

25% id,
91% cov

CAS2_SOLTU / Q9FS29: Bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial; EC 2.5.1.47; EC 4.4.1.9 from Solanum tuberosum

25% id,
90% cov

More...

Sama_1242: methionine gamma-lyase (RefSeq)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

31% id,
62% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

36% id,
50% cov

METW_YEAST / Q12198: Homocysteine/cysteine synthase; Hydrogen sulfide utilizing 1; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

25% id,
62% cov

Sama_3171: cystathionine gamma-synthase (RefSeq)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

35% id,
49% cov

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

36% id,
38% cov

METW_YEAST / Q12198: Homocysteine/cysteine synthase; Hydrogen sulfide utilizing 1; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

27% id,
44% cov

Sama_2008: cystathionine beta-lyase (RefSeq)
is similar to:
PaperBLAST

CYSD_YEAST / P06106: Homocysteine/cysteine synthase; O-acetylserine/O-acetylhomoserine sulfhydrylase; OAS-OAH SHLase; OAS-OAH sulfhydrylase; EC 2.5.1.47; EC 2.5.1.49 from Saccharomyces cerevisiae

26% id,
50% cov

Sama_2647: oxidoreductase (RefSeq)
is similar to:
PaperBLAST

CYSD1_ARATH / Q9S6Z7: Bifunctional L-3-cyanoalanine synthase/cysteine synthase D1; Beta-substituted Ala synthase 4;1; ARAth-Bsas4;1; Cysteine synthase D1; AtcysD1; O-acetylserine (thiol)-lyase 3; EC 2.5.1.47; EC 4.4.1.9 from Arabidopsis thaliana

30% id,
32% cov

Sama_2133: tryptophan synthase subunit beta (RefSeq)
is similar to:
PaperBLAST

Q767A2: cysteine synthase (EC 2.5.1.47) from Spinacia oleracea

36% id,
18% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory