Curated BLAST
Searching in Shewanella amazonensis SB2B (SB2B)
Found 19 curated entries in PaperBLAST's database that match '2.5.1.48' as complete word(s).
These curated entries have 14 distinct sequences.
Running ublast with E ≤ 0.01
Found 4 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_3171: cystathionine gamma-synthase (RefSeq)
is similar to: | PaperBLAST |
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli | 62% id,
99% cov |
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis | 45% id,
96% cov |
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori | 43% id,
99% cov |
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans | 44% id,
96% cov |
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum | 44% id,
97% cov |
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa | 39% id,
95% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 31% id,
95% cov |
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris | 39% id,
69% cov |
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum | 37% id,
70% cov |
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana | 38% id,
67% cov |
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae | 37% id,
33% cov |
More... |
Sama_1242: methionine gamma-lyase (RefSeq)
is similar to: | PaperBLAST |
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori | 45% id,
99% cov |
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans | 43% id,
97% cov |
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis | 43% id,
96% cov |
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum | 42% id,
98% cov |
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa | 42% id,
97% cov |
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli | 39% id,
98% cov |
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae | 35% id,
100% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 34% id,
99% cov |
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana | 41% id,
69% cov |
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris | 42% id,
64% cov |
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum | 41% id,
64% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 35% id,
39% cov |
More... |
Sama_2008: cystathionine beta-lyase (RefSeq)
is similar to: | PaperBLAST |
METB_ECOLI / P00935: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Escherichia coli
MetB / b3939: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli
metB / P00935: O-succinylhomoserine(thiol)-lyase / O-succinylhomoserine lyase (EC 2.5.1.48) from Escherichia coli | 35% id,
99% cov |
METB_HELPX / Q1M0P5: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Helicobacter pylori
Q1M0P5: cystathionine gamma-synthase (EC 2.5.1.48) from Helicobacter pylori | 35% id,
100% cov |
METB_MYCTU / P9WGB7: Cystathionine gamma-synthase; CGS; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Mycobacterium tuberculosis | 33% id,
95% cov |
metZ / P55218: O-succinyl-L-homoserine sulfhydrylase (EC 2.5.1.48) from Pseudomonas aeruginosa | 33% id,
95% cov |
A0PKT3: cystathionine gamma-synthase (EC 2.5.1.48) from Mycobacterium ulcerans | 33% id,
95% cov |
H7C6A2: cystathionine gamma-synthase (EC 2.5.1.48) from Corynebacterium glutamicum | 31% id,
96% cov |
HSERO_RS16440: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Herbaspirillum seropedicae | 28% id,
99% cov |
Ac3H11_2452: O-succinylhomoserine sulfhydrylase (EC 2.5.1.48) from Acidovorax sp. | 27% id,
96% cov |
L0EKR2: cystathionine gamma-synthase (EC 2.5.1.48) from Lens culinaris | 30% id,
72% cov |
L0EK12: cystathionine gamma-synthase (EC 2.5.1.48) from Cicer arietinum | 30% id,
70% cov |
CGS1_ARATH / P55217: Cystathionine gamma-synthase 1, chloroplastic; AtCGS1; METHIONINE OVERACCUMULATION 1; O-succinylhomoserine (thiol)-lyase; EC 2.5.1.48 from Arabidopsis thaliana
CGS1 / P55217: cystathionine γ-synthase (EC 2.5.1.48) from Arabidopsis thaliana | 31% id,
66% cov |
More... |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 4 reading frames. These were all redundant with annotated proteins.
by Morgan Price,
Arkin group
Lawrence Berkeley National Laboratory