Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 103 curated entries in PaperBLAST's database that match '2.6.1.1' as complete word(s).

These curated entries have 76 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1805: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

63% id,
100% cov

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

54% id,
99% cov

W0PFQ7: aspartate transaminase (EC 2.6.1.1) from Advenella mimigardefordensis

51% id,
99% cov

More...

Sama_1733: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

aspC / Q3IED5: aspartate aminotransferase (EC 2.6.1.1) from Pseudoalteromonas translucida

60% id,
99% cov

AAT_ECOLI / P00509: Aspartate aminotransferase; AspAT; Transaminase A; EC 2.6.1.1 from Escherichia coli
AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
aspC / P00509: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli
P00509: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
A0A140ND68: aspartate transaminase (EC 2.6.1.1) from Escherichia coli
D3H0F7: aspartate transaminase (EC 2.6.1.1) from Escherichia coli

48% id,
100% cov

phhC / P43336: tyrosine aminotransferase subunit (EC 2.6.1.1) from Pseudomonas aeruginosa

48% id,
98% cov

More...

Sama_3277: Serine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

serC / Q58369: phosphoserine aminotransferase monomer (EC 2.6.1.1; EC 2.6.1.52) from Methanocaldococcus jannaschii

35% id,
94% cov

Sama_1697: aminotransferase AlaT (RefSeq)
is similar to:
PaperBLAST

aspC / GB|CAA63799.1: aspartate transaminase; EC 2.6.1.1 from Geobacillus stearothermophilus

30% id,
95% cov

A0A6F8T0V6: aspartate transaminase (EC 2.6.1.1) from Geobacillus sp.

30% id,
95% cov

aspB / GB|CAB14153.1: aspartate transaminase; EC 2.6.1.1 from Bacillus subtilis

29% id,
95% cov

More...

Sama_1943: histidinol-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

hisC / P17731: histidinol-phosphate aminotransferase; tyrosine/phenylalanine aminotransferase (promiscuous) (EC 2.6.1.1; EC 2.6.1.9) from Bacillus subtilis

28% id,
99% cov

Sama_1641: polysaccharide biosynthesis protein (RefSeq)
is similar to:
PaperBLAST

Q8YY14: aspartate transaminase (EC 2.6.1.1) from Nostoc sp.

31% id,
29% cov

AAT_STRAW / Q82DR2: Aspartate aminotransferase; AAT; AspAT; EC 2.6.1.1 from Streptomyces avermitilis

33% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory