Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 110 curated entries in PaperBLAST's database that match '2.6.1.5'.

These curated entries have 79 distinct sequences.

Running ublast with E ≤ 0.01

Found 20 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1805: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

63% id,
100% cov

HP15_858: phenylalanine aminotransferase (EC 2.6.1.57) from Marinobacter adhaerens

50% id,
99% cov

PfGW456L13_4396: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

47% id,
99% cov

More...

Sama_1732: phosphoserine aminotransferase (RefSeq)
is similar to:
PaperBLAST

SERC_ECOLI / P23721: Phosphoserine aminotransferase; Phosphohydroxythreonine aminotransferase; PSAT; EC 2.6.1.52 from Escherichia coli
SerC / b0907: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
serC: phosphoserine aminotransferase; EC 2.6.1.52 from Escherichia coli
serC / P23721: phosphoserine/phosphohydroxythreonine aminotransferase (EC 2.6.1.52; EC 2.6.1.17) from Escherichia coli
P23721: phosphoserine transaminase (EC 2.6.1.52) from Escherichia coli

57% id,
100% cov

Q2F5M8: phosphoserine transaminase (EC 2.6.1.52) from Bombyx mori

46% id,
100% cov

SERC_DROME / Q9VAN0: Probable phosphoserine aminotransferase; PSAT; Phosphohydroxythreonine aminotransferase; EC 2.6.1.52 from Drosophila melanogaster

45% id,
98% cov

More...

Sama_1733: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

HP15_858: phenylalanine aminotransferase (EC 2.6.1.57) from Marinobacter adhaerens

52% id,
99% cov

Pf6N2E2_2632: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

50% id,
98% cov

AO353_18575: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

49% id,
99% cov

More...

Sama_3277: Serine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

AGT1_RABIT / P31030: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Oryctolagus cuniculus

43% id,
94% cov

AGT1_HUMAN / P21549: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase; SPT; EC 2.6.1.44; EC 2.6.1.51 from Homo sapiens
AGXT1 / P21549: Serine--pyruvate aminotransferase (EC 2.6.1.44; EC 2.6.1.51) from Homo sapiens

41% id,
96% cov

AGT1_RAT / P09139: Alanine--glyoxylate aminotransferase; AGT; Serine--pyruvate aminotransferase, mitochondrial; SPT; EC 2.6.1.44; EC 2.6.1.51 from Rattus norvegicus
Agxt / P09139: serine-pyruvate aminotransferase, mitochondrial subunit (EC 2.6.1.51) from Rattus norvegicus

43% id,
89% cov

More...

Sama_2636: 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

34% id,
97% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

28% id,
91% cov

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

27% id,
84% cov

Sama_2643: putative aminotransferase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

32% id,
99% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

32% id,
95% cov

Sama_0839: glutamate-1-semialdehyde aminotransferase (RefSeq)
is similar to:
PaperBLAST

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

33% id,
91% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

31% id,
76% cov

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

29% id,
73% cov

Sama_1697: aminotransferase AlaT (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

29% id,
96% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
96% cov

A0A2K9VP55: tyrosine transaminase (EC 2.6.1.5) from Malus domestica

26% id,
93% cov

More...

Sama_2649: beta alanine--pyruvate transaminase (RefSeq)
is similar to:
PaperBLAST

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

30% id,
95% cov

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

29% id,
94% cov

Sama_1628: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

28% id,
96% cov

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

29% id,
91% cov

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

30% id,
77% cov

Sama_3011: bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq)
is similar to:
PaperBLAST

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

29% id,
93% cov

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

28% id,
93% cov

H8WR05: tyrosine transaminase (EC 2.6.1.5) from Variovorax paradoxus

28% id,
77% cov

Sama_1943: histidinol-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

31% id,
82% cov

Sama_3606: aminotransferase, class III; 4-aminobutyrate aminotransferase (RefSeq)
is similar to:
PaperBLAST

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

26% id,
94% cov

Sama_1437: adenosylmethionine-8-amino-7-oxononanoate aminotransferase (RefSeq)
is similar to:
PaperBLAST

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

27% id,
87% cov

Sama_1641: polysaccharide biosynthesis protein (RefSeq)
is similar to:
PaperBLAST

Q4R0W2: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces ribosidificus

36% id,
65% cov

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae

34% id,
65% cov

WECE_ECOLI / P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase; EC 2.6.1.59 from Escherichia coli
Rff / b3791: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
wecE / P27833: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase (EC 2.6.1.59) from Escherichia coli

33% id,
63% cov

More...

Sama_2257: DegT/DnrJ/EryC1/StrS family protein (RefSeq)
is similar to:
PaperBLAST

WECE_ECOLI / P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase; EC 2.6.1.59 from Escherichia coli
Rff / b3791: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
wecE / P27833: dTDP-4-dehydro-6-deoxy-D-glucose transaminase (EC 2.6.1.59) from Escherichia coli
P27833: dTDP-4-amino-4,6-dideoxygalactose transaminase (EC 2.6.1.59) from Escherichia coli

27% id,
84% cov

Sama_1482: aminotransferase (RefSeq)
is similar to:
PaperBLAST

toa / D3UB67: taurine:2-oxoglutarate aminotransferase (EC 2.6.1.55) from Klebsiella oxytoca

24% id,
88% cov

A0A0A7I435: taurine-2-oxoglutarate transaminase (EC 2.6.1.55) from Bifidobacterium catenulatum

22% id,
93% cov

Sama_2329: pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis (RefSeq)
is similar to:
PaperBLAST

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae

27% id,
76% cov

GLSA_STRGR / P77952: L-glutamine:scyllo-inosose aminotransferase; Glutamine--scyllo-inositol transaminase; EC 2.6.1.50 from Streptomyces griseus
stsC / P77952: L:glutamine:2-keto-myo-inositol aminotransferase subunit (EC 2.6.1.50) from Streptomyces griseus

29% id,
61% cov

Q4R0W2: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces ribosidificus

26% id,
67% cov

Sama_1200: pyridoxal-dependent decarboxylase (RefSeq)
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

23% id,
85% cov

Sama_2016: GntR family transcriptional regulator (RefSeq)
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

23% id,
73% cov

AATR2_SCHPO / O94570: Aromatic amino acid aminotransferase C1773.13; EC 2.6.1.57 from Schizosaccharomyces pombe

26% id,
48% cov

A0A1D8PPA8: aromatic-amino-acid transaminase (EC 2.6.1.57) from Candida albicans

29% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 21 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

2006986-2008230 (frame -3) on 248323
is similar to:
PaperBLAST

Q4R0W2: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces ribosidificus
Also see hits to annotated proteins above

36% id,
67% cov

Q53U20: L-glutamine:2-deoxy-scyllo-inosose aminotransferase (EC 2.6.1.100); L-glutamine:3-amino-2,3-dideoxy-scyllo-inosose aminotransferase (EC 2.6.1.101); glutamine-scyllo-inositol transaminase (EC 2.6.1.50) from Streptomyces fradiae
Also see hits to annotated proteins above

34% id,
67% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory