Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 39 curated entries in PaperBLAST's database that match '2.6.1.57' as complete word(s).

These curated entries have 32 distinct sequences.

Running ublast with E ≤ 0.01

Found 6 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1805: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

AspC / b0928: aspartate aminotransferase (EC 2.6.1.1; EC 2.6.1.57; EC 2.6.1.27; EC 2.6.1.5; EC 2.6.1.7; EC 2.6.1.3) from Escherichia coli

63% id,
100% cov

HP15_858: phenylalanine aminotransferase (EC 2.6.1.57) from Marinobacter adhaerens

50% id,
99% cov

PfGW456L13_4396: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

47% id,
99% cov

More...

Sama_1733: aromatic amino acid aminotransferase (RefSeq)
is similar to:
PaperBLAST

HP15_858: phenylalanine aminotransferase (EC 2.6.1.57) from Marinobacter adhaerens

52% id,
99% cov

Pf6N2E2_2632: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

50% id,
98% cov

AO353_18575: tyrosine aminotransferase (EC 2.6.1.57) from Pseudomonas fluorescens

49% id,
99% cov

More...

Sama_1697: aminotransferase AlaT (RefSeq)
is similar to:
PaperBLAST

O59096: aromatic-amino-acid transaminase (EC 2.6.1.57) from Pyrococcus horikoshii

29% id,
96% cov

ARAT2_THELN / H3ZPU1: Aromatic-amino-acid aminotransferase 2; ARAT-II; AROAT; EC 2.6.1.57 from Thermococcus litoralis

29% id,
96% cov

bacF / P39643: 3-[(2S,5R)-5-hydroxy-7-oxabicyclo[4.1.0]heptan-2-yl]-2-oxopropanoate aminotransferase (EC 2.6.1.57) from Bacillus subtilis

26% id,
90% cov

More...

Sama_1943: histidinol-phosphate aminotransferase (RefSeq)
is similar to:
PaperBLAST

BPHYT_RS14905: Aromatic-amino-acid transaminase (EC 2.6.1.57) from Burkholderia phytofirmans

31% id,
82% cov

Sama_1200: pyridoxal-dependent decarboxylase (RefSeq)
is similar to:
PaperBLAST

H7CE71: aromatic-amino-acid transaminase (EC 2.6.1.57) from Rosa hybrid

23% id,
85% cov

Sama_2016: GntR family transcriptional regulator (RefSeq)
is similar to:
PaperBLAST

ARAT1_THELN / H3ZPL1: Aromatic-amino-acid aminotransferase 1; ARAT-I; AROAT; EC 2.6.1.57 from Thermococcus litoralis

23% id,
73% cov

AATR2_SCHPO / O94570: Aromatic amino acid aminotransferase C1773.13; EC 2.6.1.57 from Schizosaccharomyces pombe

26% id,
48% cov

A0A1D8PPA8: aromatic-amino-acid transaminase (EC 2.6.1.57) from Candida albicans

29% id,
22% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 6 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory