Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 29 curated entries in PaperBLAST's database that match '2.7.1.17' as complete word(s).

These curated entries have 24 distinct sequences.

Running ublast with E ≤ 0.01

Found 2 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1976: carbohydrate kinase, FGGY (RefSeq)
is similar to:
PaperBLAST

mtlY / Q4KC52: xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

27% id,
99% cov

Pf6N2E2_805: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

26% id,
99% cov

AO356_27695: Xylulose kinase (EC 2.7.1.17) from Pseudomonas fluorescens

26% id,
99% cov

Sama_0341: glycerol kinase (RefSeq)
is similar to:
PaperBLAST

Q9WXX1: xylulokinase (EC 2.7.1.17) from Thermotoga maritima

27% id,
88% cov

XYLB_LEVBR / P35850: Xylulose kinase; Xylulokinase; EC 2.7.1.17 from Levilactobacillus brevis

25% id,
89% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 2 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory