Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 472 curated entries in PaperBLAST's database that match '2.7.1.2'.

These curated entries have 315 distinct sequences.

Running ublast with E ≤ 0.01

Found 34 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1405: fructokinase (RefSeq)
is similar to:
PaperBLAST

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

100% id,
100% cov

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

68% id,
99% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

31% id,
98% cov

More...

Sama_2231: fructokinase (RefSeq)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

100% id,
100% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

68% id,
95% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
98% cov

More...

Sama_2047: uridine kinase (RefSeq)
is similar to:
PaperBLAST

Udk / b2066: uridine/cytidine kinase (EC 2.7.1.48; EC 2.7.1.213) from Escherichia coli

73% id,
98% cov

Sama_1173: thymidine kinase (RefSeq)
is similar to:
PaperBLAST

Tdk / b1238: thymidine/deoxyuridine kinase (EC 2.7.1.145; EC 2.7.1.21) from Escherichia coli

71% id,
93% cov

Q8XFQ8: thymidine kinase (EC 2.7.1.21) from Salmonella enterica

69% id,
93% cov

Q0H7D6: thymidine kinase (EC 2.7.1.21) from Yersinia enterocolitica

67% id,
95% cov

More...

Sama_0536: galactokinase (RefSeq)
is similar to:
PaperBLAST

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

62% id,
99% cov

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

41% id,
99% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

39% id,
90% cov

Sama_1649: glucose-specific PTS system component (RefSeq)
is similar to:
PaperBLAST

Crr / b2417: Enzyme IIAGlc (EC 2.7.1.199; EC 2.7.1.201; EC 2.7.1.192) from Escherichia coli

61% id,
99% cov

PTS3B_STRMU / P12655: PTS system sucrose-specific EIIBCA component; EIIBCA-Scr; EII-Scr; EC 2.7.1.211 from Streptococcus mutans
P12655: protein-Npi-phosphohistidine-sucrose phosphotransferase (EC 2.7.1.211) from Streptococcus mutans

36% id,
22% cov

Sama_2888: adenylylsulfate kinase (RefSeq)
is similar to:
PaperBLAST

CYSC_ECOLI / P0A6J1: Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase; EC 2.7.1.25 from Escherichia coli
CysC / b2750: adenylyl-sulfate kinase (EC 2.7.1.25) from Escherichia coli
cysC / P0A6J1: adenylyl-sulfate kinase (EC 2.7.1.25) from Escherichia coli

64% id,
94% cov

CYSC1_BACSU / O34577: Probable adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase; EC 2.7.1.25 from Bacillus subtilis

55% id,
95% cov

KAPS_SCHPO / Q9P7G9: Adenylyl-sulfate kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase; APS kinase; EC 2.7.1.25 from Schizosaccharomyces pombe

51% id,
98% cov

More...

Sama_2438: inorganic polyphosphate/ATP-NAD kinase (RefSeq)
is similar to:
PaperBLAST

NADK_ECOLI / P0A7B3: NAD kinase; ATP-dependent NAD kinase; EC 2.7.1.23 from Escherichia coli
YfjE / b2615: NAD kinase (EC 2.7.1.23) from Escherichia coli
P0A7B3: NAD+ kinase (EC 2.7.1.23) from Archaeoglobus fulgidus

57% id,
100% cov

NADK_SALTY / P65774: NAD kinase; ATP-dependent NAD kinase; EC 2.7.1.23 from Salmonella typhimurium

57% id,
100% cov

NADK_YERPE / Q8ZH09: NAD kinase; ATP-dependent NAD kinase; EC 2.7.1.23 from Yersinia pestis

57% id,
99% cov

More...

Sama_0923: riboflavin biosynthesis protein RibF (RefSeq)
is similar to:
PaperBLAST

YaaC / b0025: bifunctional riboflavin kinase / FMN adenylyltransferase (EC 2.7.1.26; EC 2.7.7.2) from Escherichia coli
ribF / P0AG40: bifunctional riboflavin kinase / FMN adenylyltransferase (EC 2.7.1.26; EC 2.7.7.2) from Escherichia coli

55% id,
98% cov

ribC / P54575: FMN adenylyltransferase (EC 2.7.7.2; EC 2.7.1.26) from Bacillus subtilis

37% id,
94% cov

ribCF / A3FM23: bifunctional riboflavin kinase/FAD synthase (EC 2.7.1.26; EC 2.7.7.2) from Streptomyces davaonensis
A3FM23: riboflavin kinase (EC 2.7.1.26) from Streptomyces davaonensis

35% id,
97% cov

More...

Sama_0366: dephospho-CoA kinase (RefSeq)
is similar to:
PaperBLAST

COAE_ECOLI / P0A6I9: Dephospho-CoA kinase; Dephosphocoenzyme A kinase; EC 2.7.1.24 from Escherichia coli
YacE / b0103: dephospho-CoA kinase (EC 2.7.1.24) from Escherichia coli
coaE / P0A6I9: dephospho-CoA kinase (EC 2.7.1.24) from Escherichia coli
P0A6I9: dephospho-CoA kinase (EC 2.7.1.24) from Escherichia coli

52% id,
96% cov

D5MBE3: dephospho-CoA kinase (EC 2.7.1.24) from Streptomyces peucetius

46% id,
91% cov

Q5ZVH3: dephospho-CoA kinase (EC 2.7.1.24) from Legionella pneumophila

39% id,
99% cov

More...

Sama_2815: phosphotransferase (RefSeq)
is similar to:
PaperBLAST

AMGK_PSEPK / Q88QT3: N-acetylmuramate/N-acetylglucosamine kinase; MurNAc/GlcNAc kinase; Anomeric sugar kinase; EC 2.7.1.221 from Pseudomonas putida
amgK / Q88QT3: N-acetyl-D-muramate 1-kinase (EC 2.7.1.162; EC 2.7.1.221) from Pseudomonas putida
Q88QT3: N-acetylmuramate 1-kinase (EC 2.7.1.221) from Pseudomonas putida

39% id,
98% cov

AMGK_PSEAE / Q9I5U1: N-acetylmuramate/N-acetylglucosamine kinase; MurNAc/GlcNAc kinase; Anomeric sugar kinase; EC 2.7.1.221 from Pseudomonas aeruginosa

39% id,
97% cov

AMGK_NEIMB / Q9K188: N-acetylmuramate/N-acetylglucosamine kinase; MurNAc/GlcNAc kinase; EC 2.7.1.221 from Neisseria meningitidis

39% id,
99% cov

Sama_2072: phosphoenolpyruvate synthase (RefSeq)
is similar to:
PaperBLAST

Tharo_2775 / A0A2R4BQP6: phenylphosphate synthase subunit B (EC 2.7.1.238) from Thauera aromatica

44% id,
87% cov

Tharo_2774 / A0A2R4BQP1: phenylphosphate synthase subunit A (EC 2.7.1.238) from Thauera aromatica

37% id,
17% cov

Sama_0341: glycerol kinase (RefSeq)
is similar to:
PaperBLAST

APLK_PECAS / Q6D5T8: Apulose kinase; EC 2.7.1.233 from Pectobacterium atrosepticum
aplK / Q6D5T8: apulose kinase (EC 2.7.1.233) from Pectobacterium atrosepticum
Q6D5T8: apulose kinase (EC 2.7.1.233) from Pectobacterium atrosepticum

38% id,
98% cov

Sama_1197: putative ROK-family protein (RefSeq)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

36% id,
98% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

37% id,
94% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
98% cov

More...

Sama_2890: Sulfate adenylyltransferase (RefSeq)
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

52% id,
67% cov

Sama_0291: carbohydrate kinase (RefSeq)
is similar to:
PaperBLAST

AIRSK_SALTY / Q8ZKR2: Aminoimidazole riboside kinase; AIRs kinase; EC 2.7.1.223 from Salmonella typhimurium
STM4066 / Q8ZKR2: aminoimidazole riboside kinase (EC 2.7.1.223) from Salmonella typhimurium
Q8ZKR2: aminoimidazole riboside kinase (EC 2.7.1.223) from Salmonella enterica

34% id,
97% cov

NK_METJA / Q57849: Nucleoside kinase; NK; ATP-dependent nucleoside monophosphokinase; Cytidine kinase; Guanosine-inosine kinase; EC 2.7.1.213; EC 2.7.1.73 from Methanocaldococcus jannaschii

23% id,
94% cov

F8D4I6: α-D-ribose-1-phosphate 5-kinase (ATP) (EC 2.7.1.239) from Halopiger xanaduensis

24% id,
87% cov

More...

Sama_0561: carbohydrate kinase (RefSeq)
is similar to:
PaperBLAST

AIRSK_SALTY / Q8ZKR2: Aminoimidazole riboside kinase; AIRs kinase; EC 2.7.1.223 from Salmonella typhimurium
STM4066 / Q8ZKR2: aminoimidazole riboside kinase (EC 2.7.1.223) from Salmonella typhimurium
Q8ZKR2: aminoimidazole riboside kinase (EC 2.7.1.223) from Salmonella enterica

34% id,
96% cov

deoK / Q8XGW5: deoxyribokinase monomer (EC 2.7.1.229) from Salmonella typhi

23% id,
98% cov

NK_METJA / Q57849: Nucleoside kinase; NK; ATP-dependent nucleoside monophosphokinase; Cytidine kinase; Guanosine-inosine kinase; EC 2.7.1.213; EC 2.7.1.73 from Methanocaldococcus jannaschii

23% id,
85% cov

Sama_1133: PTS system, glucose-specific IIBC component (RefSeq)
is similar to:
PaperBLAST

PTOCB_ECOLI / P19642: PTS system maltose-specific EIICB component; EC 2.7.1.208 from Escherichia coli

33% id,
97% cov

Q93Q02: protein-Npi-phosphohistidine-maltose phosphotransferase (EC 2.7.1.208) from Clostridium acetobutylicum

28% id,
98% cov

PTOCB_BACSU / P54715: PTS system maltose-specific EIICB component; EC 2.7.1.208 from Bacillus subtilis

28% id,
80% cov

More...

Sama_0848: anhydro-N-acetylmuramic acid kinase (RefSeq)
is similar to:
PaperBLAST

LGK_LIPST / B3VI55: Levoglucosan kinase; LGK; EC 2.7.1.232 from Lipomyces starkeyi
LGK / B3VI55: levoglucosan kinase (EC 2.7.1.232) from Lipomyces starkeyi
B3VI55: levoglucosan kinase (EC 2.7.1.232) from Lipomyces starkeyi

32% id,
87% cov

Sama_1976: carbohydrate kinase, FGGY (RefSeq)
is similar to:
PaperBLAST

ERYA_BRUA2 / Q2YIQ1: Erythritol kinase; EC 2.7.1.215 from Brucella abortus
eryA / Q2YIQ1: erythritol kinase (D-erythritol 1-phosphate-forming) (EC 2.7.1.215) from Brucella abortus
Q2YIQ1: erythritol kinase (D-erythritol 1-phosphate-forming) (EC 2.7.1.215) from Brucella abortus

26% id,
97% cov

Sama_3518: carbohydrate kinase (RefSeq)
is similar to:
PaperBLAST

F8D4I6: α-D-ribose-1-phosphate 5-kinase (ATP) (EC 2.7.1.239) from Halopiger xanaduensis

25% id,
99% cov

R1PK_THEKO / Q5JDG9: ADP-dependent ribose-1-phosphate kinase; ADP-R1P kinase; ADP:alpha-D-ribose-1-phosphate 5-phosphotransferase; Alpha-D-ribose-1-phosphate 5-kinase (ADP); EC 2.7.1.212 from Thermococcus kodakarensis
TK2029 / Q5JDG9: α-D-ribose-1-phosphate 5-kinase (ADP) (EC 2.7.1.212) from Thermococcus kodakarensis

23% id,
89% cov

O32153: fructoselysine 6-kinase (EC 2.7.1.218) from Bacillus subtilis

24% id,
82% cov

More...

Sama_3090: nitrogen regulatory IIA protein (RefSeq)
is similar to:
PaperBLAST

Q8DWE6: protein-Npi-phosphohistidine-D-fructose phosphotransferase (subunit 1/2) (EC 2.7.1.202) from Streptococcus mutans

24% id,
85% cov

Sama_0990: acetoin utilization protein AcuB, putative (RefSeq)
is similar to:
PaperBLAST

Tharo_2776 / A0A2R4BQP5: phenylphosphate synthase subunit C (EC 2.7.1.238) from Thauera aromatica

30% id,
61% cov

Sama_0686: ROK family protein (RefSeq)
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

26% id,
65% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

34% id,
27% cov

Sama_2762: putative diguanylate phosphodiesterase (RefSeq)
is similar to:
PaperBLAST

PTLCB_LACCA / P24400: PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Lacticaseibacillus casei

24% id,
71% cov

PTLCB_LACLL / P23531: PTS system lactose-specific EIICB component; EIICB-Lac; EII-Lac; EC 2.7.1.207 from Lactococcus lactis

22% id,
70% cov

Sama_0864: phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq)
is similar to:
PaperBLAST

P37349: phosphoenolpyruvate-glycerone phosphotransferase (subunit 1/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

28% id,
44% cov

Tharo_2774 / A0A2R4BQP1: phenylphosphate synthase subunit A (EC 2.7.1.238) from Thauera aromatica

29% id,
20% cov

Sama_0211: elongation factor Tu (RefSeq)
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

27% id,
43% cov

Sama_0199: elongation factor Tu (RefSeq)
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

27% id,
43% cov

Sama_1650: phosphotransferase system, enzyme I (RefSeq)
is similar to:
PaperBLAST

P37349: phosphoenolpyruvate-glycerone phosphotransferase (subunit 1/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

30% id,
33% cov

Sama_1524: CBS domain-containing protein (RefSeq)
is similar to:
PaperBLAST

Tharo_2776 / A0A2R4BQP5: phenylphosphate synthase subunit C (EC 2.7.1.238) from Thauera aromatica

36% id,
24% cov

Sama_3092: phosphocarrier protein NPR (RefSeq)
is similar to:
PaperBLAST

P37349: phosphoenolpyruvate-glycerone phosphotransferase (subunit 1/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

33% id,
17% cov

Sama_0968: peptide chain release factor 3 (RefSeq)
is similar to:
PaperBLAST

CYSNC_MYCTU / P9WNM5: Bifunctional enzyme CysN/CysC; EC 2.7.7.4; EC 2.7.1.25 from Mycobacterium tuberculosis
P9WNM5: adenylyl-sulfate kinase (EC 2.7.1.25) from Mycobacterium tuberculosis

22% id,
25% cov

Sama_1651: phosphocarrier protein HPr (RefSeq)
is similar to:
PaperBLAST

P37349: phosphoenolpyruvate-glycerone phosphotransferase (subunit 1/3) (EC 2.7.1.121); glycerone kinase (EC 2.7.1.29) from Escherichia coli

34% id,
15% cov

Sama_1289: extragenic suppressor protein SuhB (RefSeq)
is similar to:
PaperBLAST

NPPNK_METJA / Q58327: Bifunctional NADP phosphatase/NAD kinase; EC 2.7.1.23; EC 3.1.3.- from Methanocaldococcus jannaschii
Q58327: NAD+ kinase (EC 2.7.1.23); nocturnin (EC 3.1.3.108); fructose-bisphosphatase (EC 3.1.3.11) from Methanocaldococcus jannaschii

32% id,
13% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 33 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

1034652-1035803 (frame -1) on 248323
is similar to:
PaperBLAST

LGK_LIPST / B3VI55: Levoglucosan kinase; LGK; EC 2.7.1.232 from Lipomyces starkeyi
LGK / B3VI55: levoglucosan kinase (EC 2.7.1.232) from Lipomyces starkeyi
B3VI55: levoglucosan kinase (EC 2.7.1.232) from Lipomyces starkeyi
Also see hits to annotated proteins above

32% id,
90% cov

1853603-1855471 (frame +2) on 248323
is similar to:
PaperBLAST

Tharo_2776 / A0A2R4BQP5: phenylphosphate synthase subunit C (EC 2.7.1.238) from Thauera aromatica
Also see hits to annotated proteins above

22% id,
73% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory