Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 41 curated entries in PaperBLAST's database that match '2.7.1.2' as complete word(s).

These curated entries have 33 distinct sequences.

Running ublast with E ≤ 0.01

Found 5 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2231: fructokinase (RefSeq)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

100% id,
100% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

68% id,
95% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
98% cov

More...

Sama_1405: fructokinase (RefSeq)
is similar to:
PaperBLAST

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

100% id,
100% cov

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

68% id,
99% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

31% id,
98% cov

More...

Sama_0536: galactokinase (RefSeq)
is similar to:
PaperBLAST

B1KDE7: glucokinase (EC 2.7.1.2) from Shewanella woodyi

62% id,
99% cov

B1KRG2: glucokinase (EC 2.7.1.2) from Shewanella woodyi

41% id,
99% cov

B1KD89: glucokinase (EC 2.7.1.2) from Shewanella woodyi

39% id,
90% cov

Sama_1197: putative ROK-family protein (RefSeq)
is similar to:
PaperBLAST

Sama_2231: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

36% id,
98% cov

Sama_1405: glucokinase (EC 2.7.1.2) from Shewanella amazonensis

37% id,
94% cov

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

30% id,
98% cov

More...

Sama_0686: ROK family protein (RefSeq)
is similar to:
PaperBLAST

B1VZT1: glucokinase (EC 2.7.1.2) from Streptomyces griseus

26% id,
65% cov

glk: glucokinase; EC 2.7.1.2 from Bacillus megaterium
O31392: glucokinase (EC 2.7.1.2) from Priestia megaterium

34% id,
27% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 5 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory