Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 53 curated entries in PaperBLAST's database that match '2.7.1.4' as complete word(s).

These curated entries have 46 distinct sequences.

Running ublast with E ≤ 0.01

Found 8 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_0561: carbohydrate kinase (RefSeq)
is similar to:
PaperBLAST

Sama_0561: Fructokinase (EC 2.7.1.4) from Shewanella amazonensis

100% id,
100% cov

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

45% id,
99% cov

Q9SID0: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

38% id,
96% cov

More...

Sama_2231: fructokinase (RefSeq)
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

60% id,
100% cov

Sama_1405: fructokinase (RefSeq)
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

59% id,
100% cov

Sama_0291: carbohydrate kinase (RefSeq)
is similar to:
PaperBLAST

Sama_0561: Fructokinase (EC 2.7.1.4) from Shewanella amazonensis

52% id,
96% cov

ABZR86_RS11105: Fructokinase (EC 2.7.1.4) from Dyella japonica

43% id,
97% cov

Shewana3_0069: Fructokinase (EC 2.7.1.4) from Shewanella sp.

39% id,
100% cov

More...

Sama_3052: enoyl-CoA hydratase/isomerase family protein (RefSeq)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

42% id,
92% cov

Sama_1197: putative ROK-family protein (RefSeq)
is similar to:
PaperBLAST

MAK_ECOLI / P23917: Fructokinase; D-fructose kinase; Manno(fructo)kinase; EC 2.7.1.4 from Escherichia coli
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli
mak / P23917: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli

33% id,
99% cov

Ga0059261_1776: Fructokinase (EC 2.7.1.4) from Sphingomonas koreensis

26% id,
85% cov

Sama_1378: enoyl-CoA hydratase (RefSeq)
is similar to:
PaperBLAST

A0A0H3C585: fructokinase (EC 2.7.1.4) from Halothermothrix orenii

27% id,
96% cov

Sama_3518: carbohydrate kinase (RefSeq)
is similar to:
PaperBLAST

cscK / GB|CAA57218.2: fructokinase; EC 2.7.1.4 from Escherichia coli

24% id,
91% cov

scrK / GB|AAA08602.1: fructokinase; EC 2.7.1.4 from Salmonella enterica

24% id,
87% cov

O82616: fructokinase (EC 2.7.1.4) from Arabidopsis thaliana

26% id,
55% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 9 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory