Searching in Shewanella amazonensis SB2B (SB2B)
Found 99 curated entries in PaperBLAST's database that match '2.7.1.7'.
These curated entries have 67 distinct sequences.
Running ublast with E ≤ 0.01
Found 11 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_3368: shikimate kinase I (RefSeq) is similar to: | PaperBLAST |
AROK_ECOLI / P0A6D7: Shikimate kinase 1; SK 1; Shikimate kinase I; SKI; EC 2.7.1.71 from Escherichia coli | 79% id, 98% cov |
A0A0M3KL09: shikimate kinase (EC 2.7.1.71) from Acinetobacter baumannii | 52% id, 92% cov |
AROK_MYCTU / P9WPY3: Shikimate kinase; SK; EC 2.7.1.71 from Mycobacterium tuberculosis | 41% id, 94% cov |
| Sama_1317: inosine kinase (RefSeq) is similar to: | PaperBLAST |
INGK_ECOLI / P0AEW6: Guanosine-inosine kinase; EC 2.7.1.73 from Escherichia coli | 67% id, 100% cov |
| Sama_2231: fructokinase (RefSeq) is similar to: | PaperBLAST |
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli | 60% id, 100% cov |
SMc03109: Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti | 53% id, 100% cov |
| Sama_1405: fructokinase (RefSeq) is similar to: | PaperBLAST |
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli | 59% id, 100% cov |
SMc03109: Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti | 53% id, 98% cov |
| Sama_1197: putative ROK-family protein (RefSeq) is similar to: | PaperBLAST |
SMc03109: Mannokinase (EC 2.7.1.7) from Sinorhizobium meliloti | 36% id, 100% cov |
Mak / b0394: fructokinase (EC 2.7.1.7; EC 2.7.1.4) from Escherichia coli | 33% id, 99% cov |
rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis | 29% id, 96% cov |
| Sama_0291: carbohydrate kinase (RefSeq) is similar to: | PaperBLAST |
NK_METJA / Q57849: Nucleoside kinase; NK; ATP-dependent nucleoside monophosphokinase; Cytidine kinase; Guanosine-inosine kinase; EC 2.7.1.213; EC 2.7.1.73 from Methanocaldococcus jannaschii | 23% id, 94% cov |
| Sama_0561: carbohydrate kinase (RefSeq) is similar to: | PaperBLAST |
NK_METJA / Q57849: Nucleoside kinase; NK; ATP-dependent nucleoside monophosphokinase; Cytidine kinase; Guanosine-inosine kinase; EC 2.7.1.213; EC 2.7.1.73 from Methanocaldococcus jannaschii | 23% id, 85% cov |
| Sama_1734: 3-phosphoshikimate 1-carboxyvinyltransferase (RefSeq) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 40% id, 28% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 39% id, 28% cov |
| Sama_3367: 3-dehydroquinate synthase (RefSeq) is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 40% id, 21% cov |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 32% id, 24% cov |
| Sama_0686: ROK family protein (RefSeq) is similar to: | PaperBLAST |
rokA / Q5GBH5: glucokinase / N-acetylglucosamine kinase / mannokinase (EC 2.7.1.7; EC 2.7.1.1; EC 2.7.1.59) from Bacteroides fragilis | 37% id, 18% cov |
| Sama_0052: shikimate dehydrogenase (RefSeq) is similar to: | PaperBLAST |
ARO1_YEAST / P08566: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Saccharomyces cerevisiae | 39% id, 10% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 12 reading frames. Except for 2 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
| 1746590-1747030 (frame +2) on 248323 is similar to: | PaperBLAST |
KIPN_BPT4 / P06855: Polynucleotide kinase; PNK; Deoxynucleotide 3'-phosphatase; Polynucleotide 5'-hydroxyl-kinase; EC 2.7.1.78; EC 3.1.3.34 from Enterobacteria phage | 30% id, 48% cov |
| 54057-54890 (frame +3) on 248323 is similar to: | PaperBLAST |
ARO1_EMENI / P07547: Pentafunctional AROM polypeptide; EC 4.2.3.4; EC 2.5.1.19; EC 2.7.1.71; EC 4.2.1.10; EC 1.1.1.25 from Emericella nidulans | 31% id, 13% cov |
Lawrence Berkeley National Laboratory