Searching in Shewanella amazonensis SB2B (SB2B)
Found 52 curated entries in PaperBLAST's database that match '2.7.1.8'.
These curated entries have 36 distinct sequences.
Running ublast with E ≤ 0.01
Found 7 relevant proteins in Shewanella amazonensis SB2B, or try another query
Sama_0944: hypothetical protein (RefSeq) is similar to: | PaperBLAST |
GSPK_VIBCH / Q9KUA9: Glucosamine kinase GspK; GlcN kinase; EC 2.7.1.8 from Vibrio cholerae | 34% id, 97% cov |
Sama_0298: ATPase, BadF/BadG/BcrA/BcrD type (RefSeq) is similar to: | PaperBLAST |
GSPK_VIBCH / Q9KUA9: Glucosamine kinase GspK; GlcN kinase; EC 2.7.1.8 from Vibrio cholerae | 33% id, 95% cov |
Sama_1405: fructokinase (RefSeq) is similar to: | PaperBLAST |
BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua | 25% id, 90% cov |
Sama_2438: inorganic polyphosphate/ATP-NAD kinase (RefSeq) is similar to: | PaperBLAST |
C7GJD6: NADH kinase (EC 2.7.1.86) from Saccharomyces cerevisiae | 34% id, 50% cov |
POS5_SCHPO / Q9UT98: NADH kinase pos5, mitochondrial; EC 2.7.1.86 from Schizosaccharomyces pombe | 34% id, 50% cov |
POS5_YEAST / Q06892: NADH kinase POS5, mitochondrial; EC 2.7.1.86 from Saccharomyces cerevisiae | 32% id, 50% cov |
Sama_0731: bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase (RefSeq) is similar to: | PaperBLAST |
PUKI_ARATH / Q94AT3: Pseudouridine kinase; EC 2.7.1.83 from Arabidopsis thaliana | 21% id, 74% cov |
Sama_1197: putative ROK-family protein (RefSeq) is similar to: | PaperBLAST |
BGLK_LISIN / Q926Y3: Beta-glucoside kinase; EC 2.7.1.85 from Listeria innocua | 24% id, 52% cov |
BGLK_LISMO / Q8Y3R9: Beta-glucoside kinase; EC 2.7.1.85 from Listeria monocytogenes | 24% id, 52% cov |
Sama_3518: carbohydrate kinase (RefSeq) is similar to: | PaperBLAST |
SM_b21217: glucosamine kinase (EC 2.7.1.8) from Sinorhizobium meliloti | 35% id, 28% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 7 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.
147882-148106 (frame -1) on 248323 is similar to: | PaperBLAST |
CHKA_HUMAN / P35790: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Homo sapiens | 50% id, 8% cov |
CHKA_RAT / Q01134: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Rattus norvegicus | 49% id, 7% cov |
CHKA_MOUSE / O54804: Choline kinase alpha; CK; CHETK-alpha; Ethanolamine kinase; EK; EC 2.7.1.32; EC 2.7.1.82 from Mus musculus | 54% id, 6% cov |
Lawrence Berkeley National Laboratory