Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 25 curated entries in PaperBLAST's database that match '2.7.7.64'.

These curated entries have 17 distinct sequences.

Running ublast with E ≤ 0.01

Found 4 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2223: UTP--glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:
PaperBLAST

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

72% id,
97% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

46% id,
99% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

45% id,
98% cov

Sama_2335: putative sugar-phosphate nucleotide transferase (RefSeq)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

28% id,
96% cov

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

24% id,
90% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

25% id,
86% cov

More...

Sama_2240: glucose-1-phosphate thymidylyltransferase (RefSeq)
is similar to:
PaperBLAST

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

30% id,
81% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

40% id,
20% cov

GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU / P0AEP3: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Escherichia coli

37% id,
21% cov

More...

Sama_2814: nucleotidyl transferase (RefSeq)
is similar to:
PaperBLAST

gtaB / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Staphylococcus aureus

24% id,
88% cov

gtaB / Q05852: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Bacillus subtilis

28% id,
60% cov

aglF / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase (EC 2.7.7.64) from Haloferax volcanii

32% id,
45% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 4 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory