Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 74 curated entries in PaperBLAST's database that match '2.7.7.9'.

These curated entries have 52 distinct sequences.

Running ublast with E ≤ 0.01

Found 15 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1639: 3-deoxy-manno-octulosonate cytidylyltransferase (RefSeq)
is similar to:
PaperBLAST

KDSB_SHEON / Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase; CMP-8-amino-3,8-dideoxy-manno-octulosonate synthase; EC 2.7.7.90 from Shewanella oneidensis
kdsB / Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.90) from Shewanella oneidensis
Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.90) from Shewanella oneidensis

87% id,
100% cov

Sama_2223: UTP--glucose-1-phosphate uridylyltransferase (RefSeq)
is similar to:
PaperBLAST

GALU_ECOLI / P0AEP3: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-Glc PPase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Escherichia coli
GALU_SHIFL / P0AEP6: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Shigella flexneri
GalU / b1236: UTP—glucose-1-phosphate uridylyltransferase (EC 2.7.7.64; EC 2.7.7.9) from Escherichia coli
galU: UTP--glucose-1-phosphate uridylyltransferase; EC 2.7.7.9 from Escherichia coli

72% id,
97% cov

Q8PK83: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas citri

49% id,
97% cov

GTAB_STAA8 / Q2G1T6: UTP--glucose-1-phosphate uridylyltransferase; Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase; EC 2.7.7.9 from Staphylococcus aureus

46% id,
99% cov

More...

Sama_2814: nucleotidyl transferase (RefSeq)
is similar to:
PaperBLAST

MURU_PSEPK / Q88QT2: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Pseudomonas putida
murU / Q88QT2: N-acetyl-α-D-muramate 1-phosphate uridylyltransferase (EC 2.7.7.99) from Pseudomonas putida
Q88QT2: N-acetyl-alpha-D-muramate 1-phosphate uridylyltransferase (EC 2.7.7.99) from Pseudomonas putida

59% id,
95% cov

MURU_PSEAE / Q9I5U0: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Pseudomonas aeruginosa

53% id,
99% cov

MURU_NEIMB / Q9JXY0: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Neisseria meningitidis

51% id,
95% cov

More...

Sama_2335: putative sugar-phosphate nucleotide transferase (RefSeq)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

28% id,
96% cov

MURU_NEIMB / Q9JXY0: N-acetylmuramate alpha-1-phosphate uridylyltransferase; MurNAc-1P uridylyltransferase; MurNAc-alpha-1P uridylyltransferase; EC 2.7.7.99 from Neisseria meningitidis

27% id,
97% cov

O25363: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Helicobacter pylori

23% id,
96% cov

More...

Sama_2450: glucose-1-phosphate adenylyltransferase (RefSeq)
is similar to:
PaperBLAST

VALB_STRHJ / H2K888: Valienol-1-phosphate guanylyltransferase; Cyclitol nucleotidyltransferase; EC 2.7.7.91 from Streptomyces hygroscopicus

28% id,
95% cov

VLDB_STRHL / Q15JG4: Valienol-1-phosphate guanylyltransferase; Cyclitol nucleotidyltransferase; EC 2.7.7.91 from Streptomyces hygroscopicus
vldB / Q15JG4: valienol-1-phosphate guanylyltransferase (EC 2.7.7.91) from Streptomyces hygroscopicus

28% id,
95% cov

Sama_2240: glucose-1-phosphate thymidylyltransferase (RefSeq)
is similar to:
PaperBLAST

AGLF_HALVD / D4GYH1: UTP--glucose-1-phosphate uridylyltransferase AglF; Archaeal glycosylation protein F; EC 2.7.7.9 from Haloferax volcanii

30% id,
81% cov

Q8PK83: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Xanthomonas citri

25% id,
95% cov

Q8YS18: UTP-glucose-1-phosphate uridylyltransferase (EC 2.7.7.9) from Nostoc sp.

25% id,
93% cov

More...

Sama_0183: ADP-ribose diphosphatase NudE (RefSeq)
is similar to:
PaperBLAST

NUDT5_HUMAN / Q9UKK9: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; hNUDT5; YSA1H; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Homo sapiens
NUDT5 / Q9UKK9: ADP-D-ribose pyrophosphorylase (EC 2.7.7.96; EC 3.6.1.53) from Homo sapiens

27% id,
90% cov

NUDT5_MOUSE / Q9JKX6: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Mus musculus

25% id,
90% cov

Sama_3463: O-succinylbenzoic acid--CoA ligase (RefSeq)
is similar to:
PaperBLAST

MHAA_STRAQ / P80435: 3-hydroxy-4-methylanthranilate adenylyltransferase; 4-MHA-activating enzyme; 4-methyl-3-hydroxyanthranilic acid-AMP ligase; 4-MHA-AMP ligase; Actinomycin synthetase I; ACMS I; EC 2.7.7.97 from Streptomyces anulatus
acmA / D6R238: 3-hydroxy-4-methylanthranilate adenylyltransferase (EC 2.7.7.97) from Streptomyces anulatus

32% id,
54% cov

Sama_2336: N-acylneuraminate cytidylyltransferase (RefSeq)
is similar to:
PaperBLAST

cmas / Q90WG6: 2-keto-3-deoxy-D-glycero-D-galacto-nononate cytidylyltransferase (EC 2.7.7.92) from Oncorhynchus mykiss
Q90WG6: N-acylneuraminate cytidylyltransferase (EC 2.7.7.43); 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Oncorhynchus mykiss

33% id,
50% cov

Q99KK2: N-acylneuraminate cytidylyltransferase (EC 2.7.7.43); 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Mus musculus

32% id,
50% cov

KDSB_SHEON / Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase; CMP-8-amino-3,8-dideoxy-manno-octulosonate synthase; EC 2.7.7.90 from Shewanella oneidensis
kdsB / Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.90) from Shewanella oneidensis
Q8EEA9: 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.90) from Shewanella oneidensis

29% id,
52% cov

Sama_1184: peptide synthase (RefSeq)
is similar to:
PaperBLAST

MHAA_STRSJ / C0LTL9: 3-hydroxy-4-methylanthranilate adenylyltransferase; 4-MHA-activating enzyme; EC 2.7.7.97 from Streptosporangium sibiricum
sibE / C0LTL9: 3-hydroxy-4-methylanthranilate adenylyltransferase (EC 2.7.7.97) from Streptosporangium sibiricum

27% id,
44% cov

Sama_3047: ADP-ribose diphosphatase (RefSeq)
is similar to:
PaperBLAST

NUDT5_HUMAN / Q9UKK9: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; hNUDT5; YSA1H; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Homo sapiens
NUDT5 / Q9UKK9: ADP-D-ribose pyrophosphorylase (EC 2.7.7.96; EC 3.6.1.53) from Homo sapiens

35% id,
33% cov

NUDT5_MOUSE / Q9JKX6: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Mus musculus

43% id,
27% cov

Sama_1934: long-chain-fatty-acid--CoA ligase (RefSeq)
is similar to:
PaperBLAST

MHAA_STRSJ / C0LTL9: 3-hydroxy-4-methylanthranilate adenylyltransferase; 4-MHA-activating enzyme; EC 2.7.7.97 from Streptosporangium sibiricum
sibE / C0LTL9: 3-hydroxy-4-methylanthranilate adenylyltransferase (EC 2.7.7.97) from Streptosporangium sibiricum

29% id,
40% cov

Sama_3084: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (RefSeq)
is similar to:
PaperBLAST

Q99KK2: N-acylneuraminate cytidylyltransferase (EC 2.7.7.43); 3-deoxy-D-glycero-D-galacto-nonulopyranosonate cytidylyltransferase (EC 2.7.7.92) from Mus musculus

28% id,
39% cov

Sama_0863: dinucleoside polyphosphate hydrolase (RefSeq)
is similar to:
PaperBLAST

NUDT5_HUMAN / Q9UKK9: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; hNUDT5; YSA1H; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Homo sapiens
NUDT5 / Q9UKK9: ADP-D-ribose pyrophosphorylase (EC 2.7.7.96; EC 3.6.1.53) from Homo sapiens

39% id,
22% cov

NUDT5_MOUSE / Q9JKX6: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Mus musculus

44% id,
17% cov

Sama_3571: AMP-binding family protein (RefSeq)
is similar to:
PaperBLAST

MHAA_STRSJ / C0LTL9: 3-hydroxy-4-methylanthranilate adenylyltransferase; 4-MHA-activating enzyme; EC 2.7.7.97 from Streptosporangium sibiricum
sibE / C0LTL9: 3-hydroxy-4-methylanthranilate adenylyltransferase (EC 2.7.7.97) from Streptosporangium sibiricum

26% id,
28% cov

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 13 reading frames. Except for 1 reading frames, these were redundant with annotated proteins. These remaining reading frames may be pseudogenes, omissions in the genome annotation, or N-terminal extensions of annotated proteins.

211184-211798 (frame +2) on 248323
is similar to:
PaperBLAST

NUDT5_HUMAN / Q9UKK9: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; hNUDT5; YSA1H; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Homo sapiens
NUDT5 / Q9UKK9: ADP-D-ribose pyrophosphorylase (EC 2.7.7.96; EC 3.6.1.53) from Homo sapiens
Also see hits to annotated proteins above

27% id,
95% cov

NUDT5_MOUSE / Q9JKX6: ADP-sugar pyrophosphatase; 8-oxo-dGDP phosphatase; Nuclear ATP-synthesis protein NUDIX5; Nucleoside diphosphate-linked moiety X motif 5; Nudix motif 5; EC 3.6.1.13; EC 3.6.1.58; EC 2.7.7.96 from Mus musculus
Also see hits to annotated proteins above

25% id,
95% cov

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory