Searching in Shewanella amazonensis SB2B (SB2B)
Found 19 curated entries in PaperBLAST's database that match '3.1.2.4' as complete word(s).
These curated entries have 16 distinct sequences.
Running ublast with E ≤ 0.01
Found 8 relevant proteins in Shewanella amazonensis SB2B, or try another query
| Sama_1379: enoyl-CoA hydratase/isomerase family protein (RefSeq) is similar to: | PaperBLAST |
Pf1N1B4_4790: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 41% id, 95% cov |
PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 41% id, 95% cov |
AO353_25665: 3-hydroxy-isobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 42% id, 92% cov |
| Sama_1378: enoyl-CoA hydratase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 32% id, 100% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 25% id, 48% cov |
| Sama_2167: multifunctional fatty acid oxidation complex subunit alpha (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 33% id, 97% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 31% id, 47% cov |
| Sama_0032: multifunctional fatty acid oxidation complex subunit alpha (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 30% id, 96% cov |
| Sama_1360: enoyl-CoA hydratase/isomerase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 29% id, 98% cov |
Psest_2439: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas stutzeri | 25% id, 76% cov |
PfGW456L13_2986: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Pseudomonas fluorescens | 27% id, 61% cov |
| Sama_3635: naphthoate synthase (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 29% id, 95% cov |
| Sama_3052: enoyl-CoA hydratase/isomerase family protein (RefSeq) is similar to: | PaperBLAST |
acuK / C8YX87: acryloyl-CoA hydratase/3-hydroxypropanoyl-CoA hydrolase (EC 3.1.2.4; EC 4.2.1.116) from Halomonas sp. | 27% id, 96% cov |
| Sama_3135: enoyl-CoA hydratase (RefSeq) is similar to: | PaperBLAST |
HIBCH_RAT / Q5XIE6: 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; 3-hydroxyisobutyryl-coenzyme A hydrolase; HIB-CoA hydrolase; HIBYL-CoA-H; EC 3.1.2.4 from Rattus norvegicus | 26% id, 63% cov |
RR42_RS28545: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Cupriavidus basilensis | 28% id, 54% cov |
bch / Q81DR3: 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) from Bacillus cereus | 25% id, 50% cov |
The hits are sorted by %identity * %coverage (highest first)
Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.
Found hits to 8 reading frames. These were all redundant with annotated proteins.
Lawrence Berkeley National Laboratory