Curated BLAST for Genomes

 

Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 52 curated entries in PaperBLAST's database that match '3.5.1.1' as complete word(s).

These curated entries have 43 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_1722: cytoplasmic asparaginase I (RefSeq)
is similar to:
PaperBLAST

ASPG1_ECOLI / P0A962: L-asparaginase 1; L-asparaginase I; L-ASNase I; L-asparagine amidohydrolase I; EC 3.5.1.1 from Escherichia coli
AnsA / b1767: L-asparaginase 1 (EC 3.5.1.38; EC 3.5.1.1) from Escherichia coli

69% id,
100% cov

CA265_RS25090: L-asparaginase (EC 3.5.1.1) from Pedobacter sp.

41% id,
99% cov

AO353_09960: L-asparaginase (EC 3.5.1.1) from Pseudomonas fluorescens

37% id,
97% cov

More...

Sama_1617: asparaginase family protein (RefSeq)
is similar to:
PaperBLAST

P37595: beta-aspartyl-peptidase (EC 3.4.19.5); asparaginase (EC 3.5.1.1) from Escherichia coli

54% id,
96% cov

Q8GXG1: asparaginase (EC 3.5.1.1) from Arabidopsis thaliana

41% id,
99% cov

Q5JHT1: asparaginase (EC 3.5.1.1) from Thermococcus kodakarensis

41% id,
98% cov

More...

Sama_0299: asparaginase (RefSeq)
is similar to:
PaperBLAST

ASGL1_RAT / Q8VI04: Isoaspartyl peptidase/L-asparaginase; Asparaginase-like protein 1; Asparaginase-like sperm autoantigen; Beta-aspartyl-peptidase; Glial asparaginase; Isoaspartyl dipeptidase; L-asparagine amidohydrolase; EC 3.4.19.5; EC 3.5.1.1 from Rattus norvegicus

35% id,
94% cov

CCNA_00096: asparaginase (EC 3.5.1.1) from Caulobacter crescentus

37% id,
88% cov

ASGL1_MOUSE / Q8C0M9: Isoaspartyl peptidase/L-asparaginase; Asparaginase-like protein 1; Beta-aspartyl-peptidase; Isoaspartyl dipeptidase; L-asparagine amidohydrolase; EC 3.4.19.5; EC 3.5.1.1 from Mus musculus

37% id,
84% cov

More...

The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory