Curated BLAST for Genomes


Curated BLAST

Searching in Shewanella amazonensis SB2B (SB2B)

Found 18 curated entries in PaperBLAST's database that match '' as complete word(s).

These curated entries have 13 distinct sequences.

Running ublast with E ≤ 0.01

Found 3 relevant proteins in Shewanella amazonensis SB2B, or try another query

Sama_2101: asparagine synthetase B (RefSeq)
is similar to:

AsnB / b0674: asparagine synthetase B (EC; EC; EC; EC from Escherichia coli
asnB / P22106: asparagine synthetase B (EC; EC; EC from Escherichia coli

70% id,
100% cov

Sama_1722: cytoplasmic asparaginase I (RefSeq)
is similar to:

AnsA / b1767: L-asparaginase 1 (EC; EC from Escherichia coli
ansA / P0A962: L-asparaginase 1 (EC from Escherichia coli

69% id,
100% cov

ASPG / Q86U10: 60 kDa lysophospholipase (EC; EC from Homo sapiens

45% id,
61% cov

AnsB / b2957: L-asparaginase 2 (EC; EC from Escherichia coli
ansB / P00805: L-asparaginase 2 (EC from Escherichia coli

26% id,
92% cov

Sama_2487: glutaminase (RefSeq)
is similar to:

GlsB / b1524: glutaminase 2 (EC; EC from Escherichia coli
glsB / P0A6W0: glutaminase 2 (EC from Escherichia coli

64% id,
99% cov

GlsA / b0485: glutaminase 1 (EC; EC from Escherichia coli
glsA / P77454: glutaminase 1 (EC from Escherichia coli

36% id,
97% cov

Gls2 / P28492: glutaminase subunit (EC from Rattus norvegicus

33% id,
49% cov


The hits are sorted by %identity * %coverage (highest first)

Running ublast against the 6-frame translation. All reading frames of at least 30 codons are included.

Found hits to 3 reading frames. These were all redundant with annotated proteins.

by Morgan Price, Arkin group
Lawrence Berkeley National Laboratory